Gene BamMC406_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2875 
Symbol 
ID6177961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3194604 
End bp3195500 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID641682651 
Productalpha/beta hydrolase fold 
Protein accessionYP_001809567 
Protein GI172061915 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTG ACGCGTTTGC ATCGTTTCGC GTGACGATGC AGGACACCGA CATCTTCGGT 
GTCAAAGGAG GCGCGGGGCC GCCGCTTCTG CTGCTGCACG GCCATCCGCA GACCCACATG
ATCTGGCATC GCGTCGCCGC GACGCTGGCG AATCACTTCA CGGTGATCGC GACCGACCTG
CGCGGCTACG GCGCGTCGGG CAGGCCGCCG AGCGACGCGC GGCATGCGCC GTATTCGAAA
CGCGCGATGG CGGCCGACCA GGTCGCCGTG ATGCGGCATT TCGGCTTCGA GCAATTCCAC
GTGTGCGCGC ACGATCGCGG CGCGCGCGTC GCGCACCGGC TCGCGCTCGA TCATCCGGCT
GCCGTCGAAC GGATGATGCT GCTCGACATC GCGCCGACGC TCGCGATGTA CGAGAAAACC
GATCGTGCGT TCGCGACCGC GTATTTCCAC TGGTTCTTCC TGATCCAGCC GGCGCCGCTG
CCCGAAACGC TGATCGAAGG TCGCACCGAT GCGTATATCG AGCGCGTGAT GGGCAACCGT
TCGGCCGGGC TCGCGCCGTT CGCGCCGGAG GCGCTCGCCG CGTATCGCGC CGCGCTCGCG
CAGCCGGGCG CCGTGCATGC GATGTGCGAG GACTACCGCG CGTCGGCGAC GATCGATCTC
GAACACGACC GCGCGGATCT CGAGCGCGGC AACAAGGTCG CGTGCCCGCT GCGCGTGCTG
TGGGGCGAGC GCGGGATCGT CGGCCGCTGC TTCGATCCGC TCGACGAATG GCGGCGCGTC
GCGCGCGACG TCAGCGGCCG CGCGCTCGAT TGCGGGCACT ACATTCCGGA AGAGGCGCCT
GTCGCGCTGG TCGACGAGCT GCTCGCGTTC TTCGACGCGC GCGACGCGGC GGCGTGA
 
Protein sequence
MSFDAFASFR VTMQDTDIFG VKGGAGPPLL LLHGHPQTHM IWHRVAATLA NHFTVIATDL 
RGYGASGRPP SDARHAPYSK RAMAADQVAV MRHFGFEQFH VCAHDRGARV AHRLALDHPA
AVERMMLLDI APTLAMYEKT DRAFATAYFH WFFLIQPAPL PETLIEGRTD AYIERVMGNR
SAGLAPFAPE ALAAYRAALA QPGAVHAMCE DYRASATIDL EHDRADLERG NKVACPLRVL
WGERGIVGRC FDPLDEWRRV ARDVSGRALD CGHYIPEEAP VALVDELLAF FDARDAAA