Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2870 |
Symbol | |
ID | 6177937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3191171 |
End bp | 3192103 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682646 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_001809562 |
Protein GI | 172061910 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.534298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.868536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCC CCACCGCCGT CAAGATCGTC GAAGTCGGCC CGCGCGACGG GCTGCAGAAC GAAAAGACCT TCGTGCCGAC CGACGTGAAG ATCGCGCTGG TCGACCGGCT GTCGCGCGCC GGTTTCCGCA ACATCGAGGC CGCGTCGTTC GTGTCACCGA AATGGGTGCC GCAGATGGCC GACGGCGCCG ACGTGATGGC CGGCATCGAG CGCCGCGCGG GCACCGTGTA TTCGGTGCTC ACGCCGAACC TGAAGGGCTT CGAGAACGCG CTCGCCGCAC GCGCGGACGA AGTGGTGATC TTCGGCGCGG CGAGCGAGGC GTTCTCGCAG CGGAACATCA ACTGCAGCAT CGCGGAAAGC ATCGCGCGCT TCGAGCCGAT CGCGAAGGCC GCGAAGGATG CCGGCGTGCG GCTGCGCGGC AGCGTGTCGT GCACGCTCGG CTGCCCGTAC CAGGGCGAGG TGCCGGTCGC GTCGGTCGTC GACGTCGTCG AACGCTTCGC CGCGCTCGGC TGCGACGAGA TCGACATCGC CGACACGATC GGCGTCGGCA CGCCGAAGCG CACGCGCGAA GTGCTGTCGG CCGTCACGCG CGTGTTTCCG CGAGAACGGC TGTCGGGCCA TTTCCACGAC ACCTACGGCC AGGCGCTCGC GAACATCTAC GCGGCGCTGT TCGAAGGGAT CGAGATCTTC CACGCGTCGG TCGCCGGCCT TGGCGGCTGT CCGTACGCGA AGGGCGCGAC CGGCAACGTC GCGACCGAGG ACGTGCTGTA CCTGATGCAG GGCCTCGGCA TCGACACCGG CATCGACCTC GCGCAGGTGG TCGCCGCCGG CGACTTCATC TCGAACGCGA TCGGCCGCGC GAACGTGTCG CGCGCCGGCC GCGCGCTGCT CGCGAAGGCG CAGAGTGCGA CCGACGCGCC GAGCTGCGTC TGA
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Protein sequence | MTFPTAVKIV EVGPRDGLQN EKTFVPTDVK IALVDRLSRA GFRNIEAASF VSPKWVPQMA DGADVMAGIE RRAGTVYSVL TPNLKGFENA LAARADEVVI FGAASEAFSQ RNINCSIAES IARFEPIAKA AKDAGVRLRG SVSCTLGCPY QGEVPVASVV DVVERFAALG CDEIDIADTI GVGTPKRTRE VLSAVTRVFP RERLSGHFHD TYGQALANIY AALFEGIEIF HASVAGLGGC PYAKGATGNV ATEDVLYLMQ GLGIDTGIDL AQVVAAGDFI SNAIGRANVS RAGRALLAKA QSATDAPSCV
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