Gene BamMC406_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2870 
Symbol 
ID6177937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3191171 
End bp3192103 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID641682646 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_001809562 
Protein GI172061910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.534298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.868536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCC CCACCGCCGT CAAGATCGTC GAAGTCGGCC CGCGCGACGG GCTGCAGAAC 
GAAAAGACCT TCGTGCCGAC CGACGTGAAG ATCGCGCTGG TCGACCGGCT GTCGCGCGCC
GGTTTCCGCA ACATCGAGGC CGCGTCGTTC GTGTCACCGA AATGGGTGCC GCAGATGGCC
GACGGCGCCG ACGTGATGGC CGGCATCGAG CGCCGCGCGG GCACCGTGTA TTCGGTGCTC
ACGCCGAACC TGAAGGGCTT CGAGAACGCG CTCGCCGCAC GCGCGGACGA AGTGGTGATC
TTCGGCGCGG CGAGCGAGGC GTTCTCGCAG CGGAACATCA ACTGCAGCAT CGCGGAAAGC
ATCGCGCGCT TCGAGCCGAT CGCGAAGGCC GCGAAGGATG CCGGCGTGCG GCTGCGCGGC
AGCGTGTCGT GCACGCTCGG CTGCCCGTAC CAGGGCGAGG TGCCGGTCGC GTCGGTCGTC
GACGTCGTCG AACGCTTCGC CGCGCTCGGC TGCGACGAGA TCGACATCGC CGACACGATC
GGCGTCGGCA CGCCGAAGCG CACGCGCGAA GTGCTGTCGG CCGTCACGCG CGTGTTTCCG
CGAGAACGGC TGTCGGGCCA TTTCCACGAC ACCTACGGCC AGGCGCTCGC GAACATCTAC
GCGGCGCTGT TCGAAGGGAT CGAGATCTTC CACGCGTCGG TCGCCGGCCT TGGCGGCTGT
CCGTACGCGA AGGGCGCGAC CGGCAACGTC GCGACCGAGG ACGTGCTGTA CCTGATGCAG
GGCCTCGGCA TCGACACCGG CATCGACCTC GCGCAGGTGG TCGCCGCCGG CGACTTCATC
TCGAACGCGA TCGGCCGCGC GAACGTGTCG CGCGCCGGCC GCGCGCTGCT CGCGAAGGCG
CAGAGTGCGA CCGACGCGCC GAGCTGCGTC TGA
 
Protein sequence
MTFPTAVKIV EVGPRDGLQN EKTFVPTDVK IALVDRLSRA GFRNIEAASF VSPKWVPQMA 
DGADVMAGIE RRAGTVYSVL TPNLKGFENA LAARADEVVI FGAASEAFSQ RNINCSIAES
IARFEPIAKA AKDAGVRLRG SVSCTLGCPY QGEVPVASVV DVVERFAALG CDEIDIADTI
GVGTPKRTRE VLSAVTRVFP RERLSGHFHD TYGQALANIY AALFEGIEIF HASVAGLGGC
PYAKGATGNV ATEDVLYLMQ GLGIDTGIDL AQVVAAGDFI SNAIGRANVS RAGRALLAKA
QSATDAPSCV