| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2869 |
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| Symbol | |
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| ID | 6177994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3190201 |
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| End bp | 3191142 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682645 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001809561 |
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| Protein GI | 172061909 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.2998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.857614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TGTTCTACTC GCCGCACCAG GAAGCCGACG CATGGCGCGA CGCGATTGCG
CAGGCGCTGC CCGACGCGCA GCTGCGTGCA TGGCAGCCGG GCGACACGGC CGCCGCCGAC
TACGCGCTCG TGTGGCGCGC GCCGCGCGAG CTGTTCGCGC CGCGCGACGG CCTGCGCGCG
ATCTTCAATC TCGGCGCGGG CGTCGACGCG CTGCTCGCGC TCGAGCGCGC GCATCCCGGC
ACGCTGCCGC GCGACGTGCC GCTGGTGCGC CTCGAGGATT CAGGCATGGC GCAGCAGATG
ATCGAATACG TGACGCACGC GGTGCTGCGC TACCTGCGCC GCTTCGACGA ATACGAGGCG
CTGCAGCGCG AGCGCCGCTG GCAGGTGCTC GAACCGCATC CGCGCGCGCA CTTCACCGTC
GCGGTGCTCG GCCTCGGCGT GCTCGGTGCG CAGGTCGCGC AGGCGCTCGC CGCGCTCGGC
CTGCCGGTGC GCGGCTACAG CCGCAGCCCG AAGCAGCTCG ACGGTATCGA CACCTTCGCG
GGCGACGACG CATTCGACGC GTGCATCGAC GGCGCGAAGG TACTCGTGAA CCTGTTGCCG
AGCACGCGCG ATACCGACGG GATCCTGTCG GCGCGCACCT TCGCCCGGCT CGCACCCGGT
GCGTACCTGG TGAACGTCGC ACGCGGCGCG CATCTCGTCG AAGCCGACCT GCTCGACGCG
CTCGCAAGTG GCCAGCTCGC CGCGGCGACG CTCGACGTGT TCCAGCACGA GCCGCTGCCG
GCCGATCATC CGTTCTGGCA CGCGCCGCGC ATCACGATCA CGCCGCACTG TTCGGCCGAG
ACGCTGCGCG ACGAAGCCGT CGAGCAGATC GCGGGCAAGA TCCGCGCGCT CGAGCGCGGC
GAGCGGGTCG GCGGCGTCGT CGACTACGCG CGCGGCTACT GA
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| Protein sequence | MKILFYSPHQ EADAWRDAIA QALPDAQLRA WQPGDTAAAD YALVWRAPRE LFAPRDGLRA
IFNLGAGVDA LLALERAHPG TLPRDVPLVR LEDSGMAQQM IEYVTHAVLR YLRRFDEYEA
LQRERRWQVL EPHPRAHFTV AVLGLGVLGA QVAQALAALG LPVRGYSRSP KQLDGIDTFA
GDDAFDACID GAKVLVNLLP STRDTDGILS ARTFARLAPG AYLVNVARGA HLVEADLLDA
LASGQLAAAT LDVFQHEPLP ADHPFWHAPR ITITPHCSAE TLRDEAVEQI AGKIRALERG
ERVGGVVDYA RGY
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