| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2859 |
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| Symbol | |
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| ID | 6177854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3177688 |
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| End bp | 3179889 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682635 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001809551 |
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| Protein GI | 172061899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.335633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTT GTATTCAGTC ACGCGCGACG CCGCCGCGCC GCGCGAGCGC GTCCGTCGCA
TTCGCGATGA TGACCTGTGC GGCCGCGCCG GCCTGCGCGG ACGAGGGCGA GCCGCGGCAC
GCGCCGCACC TGAGCCCGAT CTTCGTTCAC GGCGAGCGCG ACGCGGGTTC GCGCGTCGAC
CGCTCGGGTT CCGCCAAATA TGCGACACCG CTGCTCGACG TGCCGCAGAC GATCACCGTC
GTGCCGCGCG TGGTGCTCGA CGAACAGCAG GCGCTGAGCC TGCGCGAGGC GCTGTCGAAC
GTCGCGGGCA TCACGTTCAA CGCCGGAGAG GGCGGCGGCG GTTCGGGCGA CATGTTCAAT
ATCCGCGGCT TCGGCGCGAA TGCGAATATG CAGATCGACG GGCTGCGCGA CAGCGCTCAG
AACAATCGCA GCGACCTGTT CAACATCGAG GCGGTCGAAG TCATCAAGGG GCCGAACTCG
GTCTTCGGCG GCGCGGGCAC GACGGGCGGC TCGGTGAACC TGGTCAGCAA GACGCCGAAG
GCCGGCGCGT CCACGGAAGC CGGCACGATG CTCGGCACGT CCGGCTACCG CCGCGTGACG
CTCGATGCGA ACCGGCCGCT GCCCGGCACC GACGATCGGG CGGCGTTCCG CCTGAACGCG
ATGGCGCACG TCAACGAAGT GCCGGGCCGC GACGACATCC GCAAGCGGCG CTGGGGCGTT
GCGCCGTCGC TGGCGTTCGG TCTCGGCACG CCGACGCGCG TCACGCTCGG CTATTTTCAC
CAGTACGACA ACAACCTGCC CGACTACGGG CTGCCGGCGC ACAACGGCCA GGTGCTGGCC
GGCGTATCGC GCGACAGCTA TTTCGGCTGG CGCAATCTCG ATCGCGAACG GATCACGTCG
GACGCGTTCA CCGTGAAGGC CGAACACGAC GTGTCGTCCG GCCTGAAGGT GCAGAACCTG
AGCCGCTATG CGCACCTGAA TCGCGACACC GTGATTTCCG CGTCGCACGT GAACCTGCAG
GGGCTGCCGC CCGGGCGCTA CAAGCCGGCC GGGCCGCAGG GCTACGGCCG CGATGCGTCG
ACCACGATGT GGGCGAACCA GACGAACATC ACGAGCGAGT TCGCGACGCT CGGGATCGGG
CACACGCTCG TCACCGGCTT CGAGATCTCG CGGGAAACGT ACGGCCGCAC GACCTATTCG
TACGGGCTCA ACCGCTTCTA TCCGGCCGAC GGTTTCGCGC TCGCCGCCCC GCCGGGCGTC
TGGCAAGGGC CCGCGCGGCG CCAGGACAGC GCGCGCAACG ACACGGCGCT CGTCGTGAAG
GCGCTGTACG CGTTCGACAC GATCTCGCTC GGCCGTCATT GGGACGTCGA CGTCGGGCTG
CGGCACGACT GGATCGACGG CTGGGCGGAA AGTACGCCAG CCGGCAAACC AACCGAGCGC
GCGGACAGCG ACGACCGTCA TCTGAGCACG CGCGCGGCCC TCGTGTTCAA GCCGACCGAT
AACGGCCGCG CGTATTTCGC CTACGGCACG TCGTTCAACC CGTCCGCGGA ATTTCTCGTC
ACCACCGGCT CCGGCGTGAG CGCGGCGACC GGCGCGCTCG CCCCCGAGAA AAACGAGAGC
TTCGAACTCG GCGCGAAATG GGAAGGGCTC GCGGGCATCG CGCTGAACGG CGCGCTGTTC
CAGACCGAAA AGAAGAACGC GCGCGAACGA ATGGCCGACG GCAGCTACGC GCTCGTGGGC
CGGCAACGCG TACGCGGCGT CGAACTCGGC GCCGCCGGCA AGGTGACGCC GCGCTGGGAC
CTGTTCGCGA ACTACACGTA TCTGGCGAGC GTCACGCTCA GTTCGCCGGC CACGCCGCGC
CGTGAGGGCC AGGCGCTCGG CAATACGCCG CGGCACGCAT TCAACGTGTG GACGACCTAT
CGATTGCCGG CGGGCTGGAC GATGGGCTAC GGCTCGCACT TCGTCGGCCG GCGCAACGTG
ACGTCGCAAG GCGACGGCAA GCTCGGTGCG TACTGGGTGC ACAGCCTGAT GGCCGGCTAC
GAGGTGAGCC GCCGGCTGCG CTTCCAGCTG AACGTCGACA ACCTGTTCGA CCGTGCGTAT
GTCGAACGCG TGCGGCAGGT GTCGGGGAGC GAATCGCGAT CGTCCGCGGT CGAGCTCGGC
GACGGCCGCT CGGCGATGCT GTCGGCCGTG TACACGTTCT GA
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| Protein sequence | MSRCIQSRAT PPRRASASVA FAMMTCAAAP ACADEGEPRH APHLSPIFVH GERDAGSRVD
RSGSAKYATP LLDVPQTITV VPRVVLDEQQ ALSLREALSN VAGITFNAGE GGGGSGDMFN
IRGFGANANM QIDGLRDSAQ NNRSDLFNIE AVEVIKGPNS VFGGAGTTGG SVNLVSKTPK
AGASTEAGTM LGTSGYRRVT LDANRPLPGT DDRAAFRLNA MAHVNEVPGR DDIRKRRWGV
APSLAFGLGT PTRVTLGYFH QYDNNLPDYG LPAHNGQVLA GVSRDSYFGW RNLDRERITS
DAFTVKAEHD VSSGLKVQNL SRYAHLNRDT VISASHVNLQ GLPPGRYKPA GPQGYGRDAS
TTMWANQTNI TSEFATLGIG HTLVTGFEIS RETYGRTTYS YGLNRFYPAD GFALAAPPGV
WQGPARRQDS ARNDTALVVK ALYAFDTISL GRHWDVDVGL RHDWIDGWAE STPAGKPTER
ADSDDRHLST RAALVFKPTD NGRAYFAYGT SFNPSAEFLV TTGSGVSAAT GALAPEKNES
FELGAKWEGL AGIALNGALF QTEKKNARER MADGSYALVG RQRVRGVELG AAGKVTPRWD
LFANYTYLAS VTLSSPATPR REGQALGNTP RHAFNVWTTY RLPAGWTMGY GSHFVGRRNV
TSQGDGKLGA YWVHSLMAGY EVSRRLRFQL NVDNLFDRAY VERVRQVSGS ESRSSAVELG
DGRSAMLSAV YTF
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