| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2855 |
|---|
| Symbol | |
|---|
| ID | 6177899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3172379 |
|---|
| End bp | 3173398 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641682631 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | YP_001809547 |
|---|
| Protein GI | 172061895 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.674702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA TCAAGGGAAT CGGTCGCTGG CTGCACACGG GCACCGCGGC GGCGCTGGTC
GTGGCGGCAA CGGCCGCGCA CGCGGACACG TCGATCCTGA ACGTGTCGTA CGACGTGACG
CGCGAGCTGT ACAAGGACAT CAACTCGGGC TTCGCCGCCG CGTACAAGCA GAAGACGGGC
GAAACCGTGA CGATCAAGCA GTCGCACGGC GCGTCGAGCG CGCAGGCGCT GTCGGTACTG
CAGGGGCTGC AGGCCGATGT CGTGACGATG AACCAGCCGA ACGATATCGA CCTGCTCGCC
GAGCGGGGCC AGTTGCTGCC GAAGGACTGG CGCGCGCGCT TCCCCGACAG CAGCTCGCCG
TACTCGACGA CGATGGTGTT CCTCGTGCGC AAGGGCAACC CGAAGGCGAT CAGGGACTGG
AGCGACCTCG CGAAGCCGGG CGTGCAGGTG ATCATCGCGA ACCCGAAGAC GTCCGGCAAC
GGCCGCTACG CGTATCTCGC CGCGTGGGGC TACCAGAAGC AGAAGGGCGC GACCGACCAG
CAGGCGCTCG ACTTCGAGAA GGCGATCTTC CGCAACGTGC CGGTGCTGGA TTCGGGCGGC
CGCGGCGCGA CGACGACCTT CACGCAGCGC GGCATCGGCG ACGTGCTCGT CACGTTCGAG
AACGAAGTCG CGCTGATGGA CACGGGCGCG TCGGGGGCGG AATTCGACGC CGTGTACCCG
TCGGCGAGCA TCCTCGCGGA GCCGCCCGTC GCCGTCGTCG ACAAGGTCGT CGACAAGAAG
GGCACGCGCA AGATCGCGCA GGCGTATCTC GACTACCTGT ACACGCCGCA GGCGCAGGAG
ATCATCGCGC AGCACCATCT GCGCCCGCGC GACGCGAGTG TGCTGAAGAA GCATGCGGCC
GAGTTCAAGC CGCTGAAGAC GTTCAGCGTC GAGCAGGTTT TCGGCAGCTG GGCGAACGCG
CAGAAAACCC ACTTCGCCGA CGGCGGCACG TTCGATCGCG TGATCGTCGA CCGCAAGTAG
|
|---|
| Protein sequence | MASIKGIGRW LHTGTAAALV VAATAAHADT SILNVSYDVT RELYKDINSG FAAAYKQKTG
ETVTIKQSHG ASSAQALSVL QGLQADVVTM NQPNDIDLLA ERGQLLPKDW RARFPDSSSP
YSTTMVFLVR KGNPKAIRDW SDLAKPGVQV IIANPKTSGN GRYAYLAAWG YQKQKGATDQ
QALDFEKAIF RNVPVLDSGG RGATTTFTQR GIGDVLVTFE NEVALMDTGA SGAEFDAVYP
SASILAEPPV AVVDKVVDKK GTRKIAQAYL DYLYTPQAQE IIAQHHLRPR DASVLKKHAA
EFKPLKTFSV EQVFGSWANA QKTHFADGGT FDRVIVDRK
|
|---|
| |