Gene BamMC406_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2842 
Symbol 
ID6177656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3151383 
End bp3152642 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID641682618 
Productdienelactone hydrolase and related enzyme-like protein 
Protein accessionYP_001809534 
Protein GI172061882 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.89076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA GCAAAGTATT GGTGGGATGG ATGGCGGCCT GTGCGCTGTC GGCCGCTCAG 
GCCGGTGCGC TGCCGAACGC AAATACCGGC GCAGCCGCGG CCGCCGGCTC GCTCGCCCAT
GCCGAGCGCT TCGACTACGG CGATTCGCGC CTCCCGCAGG TCGCCGCGAA CCTCAACGAA
CAAGTCATCG GCATTCCGGC CGATGCGTCG GGCACCGTGA TGCTCGAGGC CACGCTGTTC
AAGCCGGACG GCCCCGGCCC GTTCCCGCTC GTCGTCTTCA ACCATGGCAA GAACACCGGC
GATCTGCATC TGCAGCCGCG CAGCCGGCCG CTCGCGTTCG CCCGTGAGTT CGTGCGCCGC
GGCTATGCGG TGATCGCGCC GAACCGGCAA GGCTTCGCCG GGTCGGGCGG CACGTACCAG
CAGGAAGGCT GCAACGTCCG CAAGAACGGC CTCGCGCAGG CCGCCGACGT CGCCGCGACG
GTCCGCTACA TGTCGCGTCA GTCGTACATC GATGCGTCGC GCATCGTCGT CGCCGGCACG
TCGCATGGCG GCCTCGCTTC GGTCGCGTAC GGCACCGAAG CGGCGCCCGG CGTGCGCGGC
ATCATCAACT TTTCCGGCGG GCTGCGCCAG GATCTCTGCG ACGGCTGGCA GCGCAATCTC
GTCGAAGCAT TCGACCAGTA CGGCGCGCAT ACGGCCGTGC GCTCGCTGTG GCTGTACGGC
GACAACGATT CGGTGTGGAC GCCCGCGCTC GTCGCGCAGA TGCACGACGC GTACGTGTCG
CACGGCACGC AGGCGCAATT CATCGATTTC GGCCGCTACA AGGACGACGC GCACCGGCTG
ATCGTCGATC GCGACGGCGT GCCCGTGTGG TGGCCGGCCG TGCATGCGTT CCTCGCGGAC
CTGAGCCTGC CGACCTCGGT ACGCTATGCG GTCGCGAACC CGCACGAACC GAATGCGACC
GGCTACGCGT CGATCGATGC GGTCGATGCG GTGCCGTTCC TCGATGCGGC CGGCCGCGAA
GGCTATCGCC GCTTCCTGAG CCAGCATCCG AGCCGCGCGT TCGCGGTGTC CGCCGAAGGC
GCGTGGTCGT GGGCCGAAGG CGGCGACGAC CCGATGGCGC TCGCGCTCGA CAACTGCACG
AAGCAGGGTG CAGGTGCATG CCGGCTGTAT GCGGTCAACG ACCGCGTCGT GTGGAATGCG
AGCGCGACGC AGACGGCCGA TAACGGCGAC GCCGATACGC ACGCGCTGGC TTCGCGCTGA
 
Protein sequence
MAFSKVLVGW MAACALSAAQ AGALPNANTG AAAAAGSLAH AERFDYGDSR LPQVAANLNE 
QVIGIPADAS GTVMLEATLF KPDGPGPFPL VVFNHGKNTG DLHLQPRSRP LAFAREFVRR
GYAVIAPNRQ GFAGSGGTYQ QEGCNVRKNG LAQAADVAAT VRYMSRQSYI DASRIVVAGT
SHGGLASVAY GTEAAPGVRG IINFSGGLRQ DLCDGWQRNL VEAFDQYGAH TAVRSLWLYG
DNDSVWTPAL VAQMHDAYVS HGTQAQFIDF GRYKDDAHRL IVDRDGVPVW WPAVHAFLAD
LSLPTSVRYA VANPHEPNAT GYASIDAVDA VPFLDAAGRE GYRRFLSQHP SRAFAVSAEG
AWSWAEGGDD PMALALDNCT KQGAGACRLY AVNDRVVWNA SATQTADNGD ADTHALASR