| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2840 |
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| Symbol | |
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| ID | 6177647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3150120 |
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| End bp | 3150797 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682616 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001809532 |
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| Protein GI | 172061880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.703441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.858614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TACTGATCGT CGGCGCATCG CGCGGCCTCG GGCGCGAATT CGTCCGGCAA
TATCGCCGCG ACGGCTGGAA CGTGATCGCG ACTGCGCGCG ACGACGCATC GCTCGCCGCG
CTGCGCGAAC TCGGCGCGCA AGCCCATGCG CTCGACATCG CGCAACCCGA ACAGATCGCG
GCGCTCGGCT GGAAGCTCGA CGGCGAACGG CTCGACGCGG CCGTGCTCGT GTCGGGCGTG
TACGGGCCGC GCACCGAAGG CGTCGAGACG ATCGGCGCCG AGGATTTCGA CGCGGTGATG
CATACGAACG TGCGCGGGCC GATGCAGCTG CTGCCGATCC TGCTGCCGCT CGTCGAGGAC
GCGCGCGGCG TGCTGGCCGT CGTGTCGAGC CGGATGGGCA GCATCGCGGA AGCGACCGGC
ACGACCGGCT GGCTGTACCG CGCGAGCAAG GCCGCGCTGA ACGACGTGCT GCGCATCGCG
TCGCTGCAGA CGCGCCACGC CGCGTGCATC TCGCTCCATC CCGGCTGGGT GCGCACCGAC
ATGGGCGGCG CGCAGGCCGC GATCGATCCG GAAACCAGCG TGACCGGCAT GCGCCGCGTG
ATCGCCGAAG CCGGCGCGGA CGTGTCCCGG GCCAACGGCC GTTTCTTCCA GTACGACGGC
GTCGAGCTCA GCTGGTGA
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| Protein sequence | MKTVLIVGAS RGLGREFVRQ YRRDGWNVIA TARDDASLAA LRELGAQAHA LDIAQPEQIA
ALGWKLDGER LDAAVLVSGV YGPRTEGVET IGAEDFDAVM HTNVRGPMQL LPILLPLVED
ARGVLAVVSS RMGSIAEATG TTGWLYRASK AALNDVLRIA SLQTRHAACI SLHPGWVRTD
MGGAQAAIDP ETSVTGMRRV IAEAGADVSR ANGRFFQYDG VELSW
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