Gene BamMC406_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2837 
Symbol 
ID6177617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3145884 
End bp3146960 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content69% 
IMG OID641682613 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001809529 
Protein GI172061877 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.9285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TGGAACACCA ACTCGACTAT CCCTTCGCCG ACACGCTGCC CGCCGCGGGC 
GACACGTTCG AGGTCGCACC CGGCGTGCGC TGGCTGCGCA TGCCGCTGCC GTTTTCGCTC
GATCACATCA ATCTCTGGCT GCTGCGCGAC GAGATCGACG GGCAGGCCGG CTGGACGATC
GTCGACTGCG GGATCTCGTC GGAGGCGATC CGTACGCACT GGGAACAGAT CTTCGATCGG
CATCTCGACG GGCTGCCGGT GCTGCGCGTG CTCGTCACGC ACTGCCACCC CGATCACTTC
GGCCTCGCGA ACTGGCTGTG CGAAGGCGGT GACCAAGGCC GCTGGAACGT GCGGCTGTGG
ATGACGCTCG GCGAATACAT GTTCGGCTGC CTGATGGCGG CGGGCAACGG CTCGAACGCC
GGCGGCGCGG CCGCGGCCGA TCACTTCGCG CGCCACGGCT TGACCGATCC GGCCGCGCTC
GACAAGCTGC GCAGCCGCCG CAGCTACTAC TCGGATCTCG TGCCGGCCGT GCCGCCGCGC
TACCGGCGCC TGCGCGAAGG CGACGCGGTG AAGATCGGCG CGCGCACCTG GCGCGTCGTC
ACCGGCTACG GCCATTCGCC TGAACATTGC GCGCTGCACA GCGAAGCGGA CGGCGTGCTG
ATCTCCGGCG ACATGGTGCT GCCGCGCATC TCGACCAACG TGTCCGTGTT CGATCTCGAA
CCGGAAGCGA ACCCGCTCGC GCTGTACCTC GAGTCGCTCG GCCGCTACGA AACGATGGCG
CCCGACACGC TCGTGCTGCC GTCGCACGGC AAGCCGTTCC GCGGCGTGCG CACGCGCATC
GCGCAACTGC GCGCGCACCA CGACGCGCGG CTCGAGGAAG TGCGCGTCGC GTGCGCGGAG
AAGCCGATGA GTGCGGCCGG CATCGTGCCG ATCATGTTCC GCCGCCGCGA GCTCGACATC
CACCAGATGA CGTTCGCGCT CGGCGAGGCG CTCGCCCACC TGAACCTGCT GTGGCTCGCG
GGTGAGCTCG TGCGCGAGCA CGGTGACGAC GGCGTGATTC GCTACGCGAG GGCCTGA
 
Protein sequence
MNALEHQLDY PFADTLPAAG DTFEVAPGVR WLRMPLPFSL DHINLWLLRD EIDGQAGWTI 
VDCGISSEAI RTHWEQIFDR HLDGLPVLRV LVTHCHPDHF GLANWLCEGG DQGRWNVRLW
MTLGEYMFGC LMAAGNGSNA GGAAAADHFA RHGLTDPAAL DKLRSRRSYY SDLVPAVPPR
YRRLREGDAV KIGARTWRVV TGYGHSPEHC ALHSEADGVL ISGDMVLPRI STNVSVFDLE
PEANPLALYL ESLGRYETMA PDTLVLPSHG KPFRGVRTRI AQLRAHHDAR LEEVRVACAE
KPMSAAGIVP IMFRRRELDI HQMTFALGEA LAHLNLLWLA GELVREHGDD GVIRYARA