Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2835 |
Symbol | |
ID | 6177638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3142296 |
End bp | 3143891 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682611 |
Product | extracellular solute-binding protein |
Protein accession | YP_001809527 |
Protein GI | 172061875 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.827526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCCA AGCTGTTCGC CGCGGCCATG CTCGCCGCCG CCCTCGCCGT CCCCGGCCTC GCCGCCGCCA AGCCGCTCAC CGTCTGCACC GAATCGAGCC CGGACGGCTT CGACGTCGTG CAGTACAACT CGCTCGTCAC CACCAACGCA TCGGCCGACG TGATCTTCAA CACGCTCGTG TCGTACGACG AAGCCGCGAA AAAGGTCGTG CCGGCGCTCG CCGACAAATG GGAAGCCAGC GCCGACGGCC TCACGTACAC GTTCCACCTG CGGCCGAACG TCGCGTTCCA GACCACCGAC TACTTCAAGC CGGGCCGCCC GCTGAGCGCG GACGACGTCG TGTTCACGTT CACGCGGATG CTCGACGATG CAAACCCGTG GCACAAGGTG GCCGGCGCGA GCGGCTTTCC GCACGCGCAG TCGATGGGCC TCGTGAAGCT CGTGAAGTCC GTCACGAAGG TCGACGACAA CACGGTGAAG TTCGTGCTGA ACGAGCCGAA CGCCACGTTC GTGTCGATCC TGACGATGGG CTTCGCGTCG ATCTACTCGG CCGAATACGC GGACCAGCTG CTGAAGGCCG GCAAGCAGGC CGACCTGAAC GCGAAGCCGG TCGGCACCGG CCCGTTCGTG CTGAAGAGCT ACACGAAGGA CGCGCTGATC CGCTACGACG TGAACCCGAC CTACTGGGGC GCGAAGCCGA AGGTCGACCG GCTGATCTAC GCGATCACGC CCGACGCGTC CGTGCGCATG CAGAAGGTGA AGGCCGGCGA ATGCCAGATC GCGCTGTCGC CGAAGCCGCA GGACGTGCTC GCCGCGAAGG GCGAAAGCGC GCTGAAGGTC GTGCAGACGC CTGCGTTCAT GACCGCGTTC GTCGCGCTGA ACACGCAGAA GAAGCCGCTC GACAACGAGA AGGTGCGCGA GGCGCTGAAC CTCGCATTCG ACCGCGCGAC CTACCTGAAG GTCGTGTTCG ACAACACGGC GACGGCCGCG AACAACCCGT ATCCGCCGAA CACGTGGAGC TACGCGAAGG ACATCGCGCC GTATGCGTAC GATCCCGCGA AGGCGAAGCA GCTGCTTGCG TCGGCCGGTT TCCCGAACGG CTTCTCGACG ACGATCTGGA CGCGCCCGAC AGGCAGCGTG CTGAACCCGA ACCCGAAGGC CGGCGCGGAA CTGCTGCAGG CCGACCTCGC GAAGATCGGC GTGAAGGCCG AGGTGAAGGT GATCGAATGG GGCGAGCTGA TCAAGCAGGC GAAGCTCGGC CAGCATGACA TGCTGTTCAT GGGCTGGGCC GGCGACAACG GCGATCCGGA CAACTACCTG TCGCCGCTGT TCAGCTGCAA CGCGGTGAAG TCGGGCATCA ACTTCGCGCG CTTCTGCGAC GCGCAGCTCG ACAAGCTGAT CGCCGACGGC AAATCGACCG CCGACCAGGC CAAGCGCGCG AAGCTGTACG AATCGGCGCA GAAGGTGATC CACGACCAGG CGCTGTGGAT TCCGCTCGGC TACCCGACCG CGGCGGCGCT CACGCGCACG AACGTGAGCG GTTATCGCGT GAGTCCGTTC GGACGGCAGA ACTTCACGAC CGTCTCCGTG CAGTAA
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Protein sequence | MHAKLFAAAM LAAALAVPGL AAAKPLTVCT ESSPDGFDVV QYNSLVTTNA SADVIFNTLV SYDEAAKKVV PALADKWEAS ADGLTYTFHL RPNVAFQTTD YFKPGRPLSA DDVVFTFTRM LDDANPWHKV AGASGFPHAQ SMGLVKLVKS VTKVDDNTVK FVLNEPNATF VSILTMGFAS IYSAEYADQL LKAGKQADLN AKPVGTGPFV LKSYTKDALI RYDVNPTYWG AKPKVDRLIY AITPDASVRM QKVKAGECQI ALSPKPQDVL AAKGESALKV VQTPAFMTAF VALNTQKKPL DNEKVREALN LAFDRATYLK VVFDNTATAA NNPYPPNTWS YAKDIAPYAY DPAKAKQLLA SAGFPNGFST TIWTRPTGSV LNPNPKAGAE LLQADLAKIG VKAEVKVIEW GELIKQAKLG QHDMLFMGWA GDNGDPDNYL SPLFSCNAVK SGINFARFCD AQLDKLIADG KSTADQAKRA KLYESAQKVI HDQALWIPLG YPTAAALTRT NVSGYRVSPF GRQNFTTVSV Q
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