Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2834 |
Symbol | |
ID | 6177671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3141154 |
End bp | 3141927 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682610 |
Product | short chain dehydrogenase |
Protein accession | YP_001809526 |
Protein GI | 172061874 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.499263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTC CGCTGAAGGT CTTCATCACC GGCGCGTCGA GCGGCCTCGG CCTCGCGATG GCCGAGGAAT ACGCCCGCCA GGGCGCCACG CTCGCTCTCG TCGCGCGCCG CACCGATGCC CTCGATGCGT TCGCGCGGCG CTTCCCCAAG CTGTCCGTCT CCGTCTACTC CGCCGACGTG CGCGACGCCG ATGCGCTCGC GACGGCCGCC GCGTCGTTCA TCGCCGCGCA CGGCTGCCCC GACGTCGTGA TCGCGAACGC GGGCATCAGC CAGGGCGCCG TCACGGGCCA GGGCGACCTC GCCACGTTCC GCGACGTGAT GGACATCAAC TACTACGGGA TGGTCGCGAC GTTCGAGCCG TTCGTCGGCC CGATGACGGC CGCGCGCCAC GGCACGCTGG TCGGCGTCGC GAGCGTCGCC GGCGTGCGCG GCCTGCCCGG CTCCGGCGCG TACAGCGCGT CGAAGTCGGC CGCGATCAAG TATCTCGAGG CGCTGCGCGT CGAGCTGCGC CCGGCCGGCG TCGGCGTCGT GACGATCGCG CCCGGCTATA TCCGCACGCC GATGACCGCG CACAACCCGT ACCGGATGCC GTTCCTGATG GACGCCGATC GCTTCGCTGC GCGCGCGGCG AAAGCGATCG CACGGCAGCA CGCGTTCCGC GTGATTCCGT GGCAGATGGG CGTCGTCGCG AAGGTGCTGC ACGTGTTGCC GCGCTGGCTC TACGACCGCC TGTTCGAGAA GGCGCCGCGC AAGCCGAAGG CCGGCGCGCA CTGA
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Protein sequence | MTTPLKVFIT GASSGLGLAM AEEYARQGAT LALVARRTDA LDAFARRFPK LSVSVYSADV RDADALATAA ASFIAAHGCP DVVIANAGIS QGAVTGQGDL ATFRDVMDIN YYGMVATFEP FVGPMTAARH GTLVGVASVA GVRGLPGSGA YSASKSAAIK YLEALRVELR PAGVGVVTIA PGYIRTPMTA HNPYRMPFLM DADRFAARAA KAIARQHAFR VIPWQMGVVA KVLHVLPRWL YDRLFEKAPR KPKAGAH
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