Gene BamMC406_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2824 
Symbol 
ID6177580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3128963 
End bp3129955 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content69% 
IMG OID641682600 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001809516 
Protein GI172061864 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.444988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CATCGCTGAA GGACGGCACG CGCGACGGCC AGCTGATCGT CGTATCGCGC 
GACCTGCACA CCGCGGCGAT CGCCGATGCG ATCGCACCGA CGCTGCAGCG CGTCCTCGAC
GACTGGGCGT TCTACGCGCC GCAACTGCGC GACCTGTACG ACGCGCTGAA CCACGGCCGC
GCGCGCAACG CGTTCGCGTT CGATCCGGCG AACTGCATGG CGCCGCTGCC GCGCGCGTTC
CAGTGGGCAG ACGGTTCCGC GTACGTGAAT CACGTCGAGC TCGTGCGCCG CGCGCGCGGC
GCCGAGATGC CGCCGGAGTT CTGGACCGAT CCGCTGATGT ACCAGGGCGG CAGCGACGAC
TTCCTCGGCG CGCGCGACGA CATCGTCTGC GCGTCCGAGG AGTGGGGCAT CGACTTCGAG
GCCGAAGTCG CGGTGATCAC CGGCGACGTC CCGATGAGCG CATCGCCCGA CGACGCGCTG
AAGGCCGTGC GGCTCGTCAC GCTCGTGAAC GACGTGTCGT TGCGCAACCT GATTCCGGCC
GAGCTCGCGA AGGGCTTCGG CTTCTTCCAG AGCAAGCCGG CCACCGCGTT CGCACCGGTC
GCGGTGACCC TCGACGAGCT CGGCGAAGAA TGGCGCGAAG GCCGCGTGCA CCGGCCGATG
ATCGTCCACT GGAACGGCAG GAAGGTCGGC CAGCCCGACG CGGGCACCGA CATGGTGTTC
CACTTCGGCC AGCTGGTCGC GCATGCGGCG AAGACGCGCA ACCTGCGTGC CGGCTCGATC
GTCGGCTCGG GCACCGTGTC GAACAAGGAC GCGAAGCGCG GCTACTGCTG CATCGCCGAG
AAGCGCTGCC TCGAGACGAT CGAGCACGGC GCGCCGCAGA CCGAATTCAT GCGCTATGGC
GACACCGTGC GCATCGAGAT GTTCGACTCG GCCGGCAAGT CGATCTTCGG CGCGATCGAG
CAGTCGGTCG CACCGCCCGA CGGCGCGGCC TGA
 
Protein sequence
MKLASLKDGT RDGQLIVVSR DLHTAAIADA IAPTLQRVLD DWAFYAPQLR DLYDALNHGR 
ARNAFAFDPA NCMAPLPRAF QWADGSAYVN HVELVRRARG AEMPPEFWTD PLMYQGGSDD
FLGARDDIVC ASEEWGIDFE AEVAVITGDV PMSASPDDAL KAVRLVTLVN DVSLRNLIPA
ELAKGFGFFQ SKPATAFAPV AVTLDELGEE WREGRVHRPM IVHWNGRKVG QPDAGTDMVF
HFGQLVAHAA KTRNLRAGSI VGSGTVSNKD AKRGYCCIAE KRCLETIEHG APQTEFMRYG
DTVRIEMFDS AGKSIFGAIE QSVAPPDGAA