| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2810 |
|---|
| Symbol | |
|---|
| ID | 6177465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3113852 |
|---|
| End bp | 3114787 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641682587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001809503 |
|---|
| Protein GI | 172061851 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.177575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA AATCACATGC GTTCTGGGCC GGCCTGTTCA CGATCGCGCT GACGCTGGCG
ATCGCGGGCA CCGTGTTCTG GTTCAACGTC GACCGCACCG TGCGCGTGCC GTACGACCTG
CTCGCGCGCA CCAACGTGAC GGGCCTGTTC CCCGATGCGG CCGTGCGCTT TCGCGGGCTC
GACGTCGGCA AGGTGCAGTC GATCGGCTTC GACCGCACGC ATCCGGGCCA GATCCGGATC
CGGATTCTCG TCGACCGTGA TGCGCCGATC ACGCAGTCGA CCTACGGCAG CCTTGGCTTC
CAGGGCGTGA CGGGCATCGC GTTCGTGCAG TTGGAGGACA CCGGCCGCGA CCTGGCGCCG
CTGCCGTCGT CGCCGAAGTC GATCGCGCAG ATTCCGATGC GGCCGAGCCT GTTCGACCAG
ATCCAGGAGC GCGGCGACGT GCTGTTGCGG CAGCTCGAGC AGGCCGCGGA AAGCGCGAAC
GCGCTGATGT CGCCGGAGAT GCGCGAGCAG TTGCGCGCGA CGGCCGAAAG CCTGCAGCAC
GCGGCGGACG GCGCGGCGAC GCTGTCGAAG CAGCTCGCGC CGGCGGTGGC CGCGCTGCCG
CAGACGATGC ACCAGGTCGA TCGCGCGATG GCATCCGCAA ACACGCTGCT GCAGCCGAAC
GGGCCGCTCG TGTCGAACCT GAACAAGGCC GGCTCGGCCG CGGAGCAGGT CGGCGTCGCG
CTGAACGACC TGAACGCGCG GGTCCAGTAC GACACGCTGC CGCGTTTCAA CACGCTGGCG
GACAGCGTCG GCGATGCGTC GCGGCAATTG AAGGACGTCG CCGGTGAACT CGGCCGCAAC
CCGAGCAGTC TGTTGTTCGG TTCGCCCGGC GCCGCGCCCG GGCCTGGCGA AGCAGGCTTC
GTCTGGCCGG GCAAGGGTGC GGCGGCCGGC AAATGA
|
|---|
| Protein sequence | MENKSHAFWA GLFTIALTLA IAGTVFWFNV DRTVRVPYDL LARTNVTGLF PDAAVRFRGL
DVGKVQSIGF DRTHPGQIRI RILVDRDAPI TQSTYGSLGF QGVTGIAFVQ LEDTGRDLAP
LPSSPKSIAQ IPMRPSLFDQ IQERGDVLLR QLEQAAESAN ALMSPEMREQ LRATAESLQH
AADGAATLSK QLAPAVAALP QTMHQVDRAM ASANTLLQPN GPLVSNLNKA GSAAEQVGVA
LNDLNARVQY DTLPRFNTLA DSVGDASRQL KDVAGELGRN PSSLLFGSPG AAPGPGEAGF
VWPGKGAAAG K
|
|---|
| |