Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2809 |
Symbol | |
ID | 6178614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3113139 |
End bp | 3113762 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641682586 |
Product | ABC-type uncharacterized transport system auxiliary component-like protein |
Protein accession | YP_001809502 |
Protein GI | 172061850 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.357609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAA TCCTTGATCG CGCGCTGCGT CCGGCCGCGA CCGCCCTCGC GATGCTGATG CTCGCGTTCG CCGCCGGCTG CGCCGGCAAC GGCGCGGCGC TGTCGAACGT CCGCTACGAC CTCGGGCCGG CCGCGTCGGT CGTGACGGCC GGTACGGGCC CCGCGCTGAA GGTGCTCGAC GTCGCCGCGC CCGATGCGCT CGACACGGAC AAGTTCGTCT ACCGCCTCAC GTATGCGGAT GCGCAGCGCA CGGCCGTCTA TCGCGACAGC CGCTGGACCG CACCGCCCGC GCAACTGCTC ACGCAGCGGC TGCGCGGCGC GCTGTCGTCG CGCGGCGCGG TGCTCGAAGG CTCCGACGGC GTGCGCGCAC CGACGCTGAA GGTCGACCTG AACGAATTCG AGCAGGTGTT CGACGGGGAG TCGCAGAGTC ACGGCGCGGT CACCGCGCGC GCGACGCTGA TGCAGGACGG CAAGGTGCTC GGCCAGCGCA CGTTCATCGC GCGCGCACCG TCGAGCACGC CCGATGCGGC CGGCGGCGCG CGTGCGCTCG CGGCCGCGAG CGACGAGCTC GTGTCGCAGA TCGCCGCCTG GGTCGGCGTG CAGGCGTACG CGGGCAACCC GTGA
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Protein sequence | MPRILDRALR PAATALAMLM LAFAAGCAGN GAALSNVRYD LGPAASVVTA GTGPALKVLD VAAPDALDTD KFVYRLTYAD AQRTAVYRDS RWTAPPAQLL TQRLRGALSS RGAVLEGSDG VRAPTLKVDL NEFEQVFDGE SQSHGAVTAR ATLMQDGKVL GQRTFIARAP SSTPDAAGGA RALAAASDEL VSQIAAWVGV QAYAGNP
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