| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2796 |
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| Symbol | |
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| ID | 6177532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3098887 |
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| End bp | 3101022 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682573 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001809489 |
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| Protein GI | 172061837 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.732843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA CCGCTTTCCC CGAACCCTCC CGCGCCGGGA CCGTCACGCG CGAACGGCGC
GACAAGGTGC TCGTCGTCAC GATCGACCAT CCACCCGTCA ACGCGTTGTC CGCCGACGTG
CGGCGCGGCC TGGCCGACGC GCTCGACGCC GCGCAGACCG ACGACGCGAT CCGCGCGGTG
CTGATCGTCG GCGCCGGCCG CAACTTCATC GCGGGCGCCG ACATCCGCGA ATTCGGCAAG
CCGCCGGTGC CGCCGTCGCT GCCCGACGTG TGCGAGCAAA TCGAGTCGAG CGCGAAGCCG
GTCGTGGTCG CGCTGCACGG CGCGACGCTC GGCGGCGGCC TCGAGGTCGC GCTCGCCGCG
CATTACCGGC TCGCGGTGCC CGGCGCGAAG CTGGGGCTGC CCGAAGTCAC GCTCGGCCTG
CTGCCGGGCG CCGGCGGCAC GCAGCGCGCG CCGCGCTTGA TCGGCGCGAA GGCCGCGCTC
GACCTGATGC TGACGGGGCG TCACGCGAGC GCCGACGAAG CGCTCGCGCT CGGCCTCGTC
GACCGCCTCG CGCACAGCGA CGACACGCTC GCCGAAGGCC TGGCCTATGC GCAGGAACTC
GTGTCGCTCG GCGCGCCGGC ACGGCGCACG CGCGAGGCGC GGGGGCTCGC CGATCGCGCG
AGCGCGCAGG CCGCGATCGA CGCGGCGCGC GCCGATTTGC CGAAGAAGTC GCGCGGCCTG
TTCTCGCCGG CGAAGATCGT CGACGCGGTC GAGGCCGCGC TCACGCAGTC GTTCGACGCG
GGGATGAAGC TCGAACGCAG CCTGTTCCTG CAGTGCATCG ACAGCCCGCA GCGCGCGGGC
CTCGTGCACG CGTTCTTCGC GGAACGCGAG GCGGCGAAGG CGCCCGAGGC GCGCCGCGCG
AGCGCGCGTC CGGTCGAGCG GATCGGCGTG GTCGGCGGCG GCACGATGGG CGCGGGGATC
GCGGTCGCGG CGCTCGATGC CGGGCTGCCC GTGACGATGA TCGAGCGCGA CGAAGCGTCG
CTCGCACGCG GCCGCGCGCA CGTCGAGAAG GTCTACGACG GTCTCGTCGC GAAGGGCCGG
ATGACGCCGG CCGCGCATGC GGCGCGGCTC GCGCGCTTCA AGGGCAGCAC GTCGTACGAC
GCGCTCGCGC AGGCCGATGT CGTGATCGAG GCCGTGTTCG AGGACATGGC CGTGAAGAAG
GCGGTGTTCG CCGAACTCGC GCGCGTGTGC AAGCCGGGCG CGGTGCTCGC GACCAACACG
TCGTATCTCG ACATCGACGA ACTGGCGGCC ACCATCGACC GGCCGGCCGA CGTGGTCGGC
CTGCATTTCT TCTCGCCGGC CAACGTGATG AAGCTGCTCG AGATCGTCGT GCCGGCACGC
GTGAGCGCGG AGGTCGTCGC GACGGCGTTC GCGCTCGCGA AGCAGCTGAA GAAGACGCCG
GTACGCGCGG GCGTGTGCGA CGGCTTCATC GGCAACCGGA TCCTCGCGGT CTACCGCACC
GCGGCCGACT ACCTGATGGA GGACGGCGCG TCGCCGTACC AGATCGATCG CGCGGTGCGC
GAATTCGGCT TTCCGATGGG ACCGTTCCAG GTCGTCGACC TCGCGGGCGG CGACATCGGC
TGGGCGACCC GCAAGCGCCG CGCGGCGACG CGCGACCCGC GCGCGCGCTA CGTGGAAATT
TCCGATCGGC TGTGCGAGCG CGGCTGGTTC GGGCAGAAGA CCGCGCGCGG CTACTACCTG
TACCCGGACG GCGCGCGCGT CGGCACGCCG GACCCGGAAG TCGAGGCCAT TGCCGCCGAC
GAGCGCGCGA AAAAAGGCAT CACGCCGCGC GCGTTCAGCG ACGACGAGAT CCTGCGCCGT
TACCTCGCCG CGATGATCAA CGAAGGCGCG AACGTCGTGC ACGAGAAGAT CGCGCTGCGC
CCGCTCGACG TCGACGCGGT GTTCCTGCAC GGCTACGGCT TCCCGCGCTA TCGCGGCGGC
CCGATGCACT ACGCGGACAC GGTCGGCCTC GCGAACGTGC TCGCCGACAT TCGCGCGTTC
GCGAACGAGG ATCCGCTGTT CTGGAAGCCT TCGCCGCTGA TCGTCGAGCT GGTCGAGCGC
GGCGCGGATT TCGCGAGCCT GAACCACATC GACTGA
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| Protein sequence | MNSTAFPEPS RAGTVTRERR DKVLVVTIDH PPVNALSADV RRGLADALDA AQTDDAIRAV
LIVGAGRNFI AGADIREFGK PPVPPSLPDV CEQIESSAKP VVVALHGATL GGGLEVALAA
HYRLAVPGAK LGLPEVTLGL LPGAGGTQRA PRLIGAKAAL DLMLTGRHAS ADEALALGLV
DRLAHSDDTL AEGLAYAQEL VSLGAPARRT REARGLADRA SAQAAIDAAR ADLPKKSRGL
FSPAKIVDAV EAALTQSFDA GMKLERSLFL QCIDSPQRAG LVHAFFAERE AAKAPEARRA
SARPVERIGV VGGGTMGAGI AVAALDAGLP VTMIERDEAS LARGRAHVEK VYDGLVAKGR
MTPAAHAARL ARFKGSTSYD ALAQADVVIE AVFEDMAVKK AVFAELARVC KPGAVLATNT
SYLDIDELAA TIDRPADVVG LHFFSPANVM KLLEIVVPAR VSAEVVATAF ALAKQLKKTP
VRAGVCDGFI GNRILAVYRT AADYLMEDGA SPYQIDRAVR EFGFPMGPFQ VVDLAGGDIG
WATRKRRAAT RDPRARYVEI SDRLCERGWF GQKTARGYYL YPDGARVGTP DPEVEAIAAD
ERAKKGITPR AFSDDEILRR YLAAMINEGA NVVHEKIALR PLDVDAVFLH GYGFPRYRGG
PMHYADTVGL ANVLADIRAF ANEDPLFWKP SPLIVELVER GADFASLNHI D
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