| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2789 |
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| Symbol | |
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| ID | 6176205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3089334 |
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| End bp | 3091367 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682566 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001809482 |
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| Protein GI | 172061830 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC AGGCGGCGGT TCCGCCCGCG GCCGCCGCGC CGCGCGGCGG CCCGGGCGGT
CGGGCCGGTG ATGCGGAGCC CTATGACACA ATAGGCGATC CGCATCGCCA GGAAGTCACG
TCCGTGAAGC GCCGCCTGCT CATCCTCGTC GTGCTTGCCG TCGCGCTCGC GGCGGCGTGC
GCGCTGACGT GGACCATCAC GTGGCGGCGC GGCGTCGCGG AGCTGCAGCG CAACGCCGCG
GTGCGCGTCG ACCGCACCAC CAACGCGCTC AAGAGCACGC TCGACCGCTA CGAATCGCTG
CCTTATCTGC TCGGCAGCCA TCCGTACGTG CAGGACCTGC TCGCCGAGCC GAAGCGCACC
GATTTCACCG GGCGCGCGAA CCGTTATCTC GAAGATCTCA ACGAACACGC GCACGCGACC
GTCACCTACG TGGTCGGCGC GGACGGCCTG TGCGTCGCCG CCAGCAACTG GCGCGCGCCC
GACAGCTTCG TCGGGATCGA ATACCGCTTC CGTCCTTATT TCATCGACGC GATGAACGGC
CGGGTCGGCC GCTTCTTCGG GATCGGCACG ATCTCGCGCG ACCCCGGCTA CTACATCTCG
CAGCCGGTGC GGCGCGACGG CAAGATCGTG GGTGTCGTCG TCGTGAAACT CAATCTCGAA
TGGTTCCAGG GCGCCGATGC GTCCGAACCG CTCGTCGTCG CGGACGATCA CGGCGTCGTG
TTCCTGTCGT CCGTGCCCGC GTGGAAATAC CACACGCTGC ATCCATTGAC GGGGCCCGTC
GCCGCGTCGA TCTACGAGAC GCGCCAGTAC GCGCAGCAGC CCGTCACGCC GCTGCCGCTG
CGCGTCGAGC AGGTGCTCGG CGCGGACGCG GAGATCGTGC GCCTCGGCGC GGCCGGCGTA
GGCCCGGGCC TGCGCGCACC GCGCTTCCTG GCCAGCAAGC GGCGGATCGG CGAACCCGAC
TGGCTGCTCG TCACGCTCGC GCCGATCGCA CCGATCGACG CCGATGCGCG CAACGCGACC
ATCGTCACGG GCTTCGGCTT CGTGTCGGTG GCGTTGCTCG CGTTCTACTG GCGCATGCGC
CGCGCGCGCG TGCGCGAGAT GATCCGCGGC CGCGCGCTGC TGCAGCAGGC GTATGCGGAG
CTGAACCGGC GCGTCGAGGA ACGCACGGCC GACCTGTCGG AGGCGAACGA GCAATTGCAG
AAGGAAGTCG GCGACCGGAT CCGCGCGGAA CAGGAATTGC GCGCCGCGCA CGACGAACTG
ATCCAGGCGA GCAAGCTCGC CGCGCTCGGC CAGATGGCGG CCGGCATCAC GCATGAACTG
AACCAGCCGC TCGCGGCATT GCGCAGCTTC TCCGACAACA CGCGCGTGCT GCTCGATCGC
GGCGAGCAGG CAGCCGCGCG CGAGAACCTC GAGGCGATCG CCGCGCTGAC CGAGCGGATG
GGCAAGATCA CCAACCAGCT GAAGCTGTTC GTCGGCCGCG CGAAGCCGCG CAACGAACAG
GCGCTGGTCG TGCGCGCGCT GCGCAGCGTG CTGTCGCTGC TCGGCGAGCG GCTGCGCGGC
GTCGCCCTCA CGCTGACGCT GCAGGATGCG ACCGTGTCGC CCGCGCAGGA TGCGCCGCTC
GACCTCGCGC GCGACTATCC GGACCTCGTC GCCCGCTGCG AGGACCTGCG CCTCGAACAG
GTGCTGATCA ACCTGCTCGG CAACGCGCTC GACGCGGTCG CGGGTGTCAC GGCGCCGGCG
ATCGAAGTGA CGATCGCGGT GTCGGTCGCG ACGCTGGCGG TCGAGGTGCG CGACAACGGC
CCGGGTATCG CGCCCGACCT GCTGCCGCGC TTGTTCGAAC CGTTCTTCAC AACCAAGGAA
ATGGGGCGCG GGCTCGGGCT CGGCCTCGCG ATCTCGTCGT CGATCGCGAG CGACGCGGGC
GGCGCGCTGA CCGCGCGCAA TGCGCCGTCC GGCGGCGCGC TGTTCGTCTT GACGCTGCGG
CGCACGCGCA CGCATCATCC GGACTCCCTG TCCGAGCCGG CGGGCTCGCG CTAG
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| Protein sequence | MNEQAAVPPA AAAPRGGPGG RAGDAEPYDT IGDPHRQEVT SVKRRLLILV VLAVALAAAC
ALTWTITWRR GVAELQRNAA VRVDRTTNAL KSTLDRYESL PYLLGSHPYV QDLLAEPKRT
DFTGRANRYL EDLNEHAHAT VTYVVGADGL CVAASNWRAP DSFVGIEYRF RPYFIDAMNG
RVGRFFGIGT ISRDPGYYIS QPVRRDGKIV GVVVVKLNLE WFQGADASEP LVVADDHGVV
FLSSVPAWKY HTLHPLTGPV AASIYETRQY AQQPVTPLPL RVEQVLGADA EIVRLGAAGV
GPGLRAPRFL ASKRRIGEPD WLLVTLAPIA PIDADARNAT IVTGFGFVSV ALLAFYWRMR
RARVREMIRG RALLQQAYAE LNRRVEERTA DLSEANEQLQ KEVGDRIRAE QELRAAHDEL
IQASKLAALG QMAAGITHEL NQPLAALRSF SDNTRVLLDR GEQAAARENL EAIAALTERM
GKITNQLKLF VGRAKPRNEQ ALVVRALRSV LSLLGERLRG VALTLTLQDA TVSPAQDAPL
DLARDYPDLV ARCEDLRLEQ VLINLLGNAL DAVAGVTAPA IEVTIAVSVA TLAVEVRDNG
PGIAPDLLPR LFEPFFTTKE MGRGLGLGLA ISSSIASDAG GALTARNAPS GGALFVLTLR
RTRTHHPDSL SEPAGSR
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