Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2789 |
Symbol | |
ID | 6176205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3089334 |
End bp | 3091367 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641682566 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001809482 |
Protein GI | 172061830 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC AGGCGGCGGT TCCGCCCGCG GCCGCCGCGC CGCGCGGCGG CCCGGGCGGT CGGGCCGGTG ATGCGGAGCC CTATGACACA ATAGGCGATC CGCATCGCCA GGAAGTCACG TCCGTGAAGC GCCGCCTGCT CATCCTCGTC GTGCTTGCCG TCGCGCTCGC GGCGGCGTGC GCGCTGACGT GGACCATCAC GTGGCGGCGC GGCGTCGCGG AGCTGCAGCG CAACGCCGCG GTGCGCGTCG ACCGCACCAC CAACGCGCTC AAGAGCACGC TCGACCGCTA CGAATCGCTG CCTTATCTGC TCGGCAGCCA TCCGTACGTG CAGGACCTGC TCGCCGAGCC GAAGCGCACC GATTTCACCG GGCGCGCGAA CCGTTATCTC GAAGATCTCA ACGAACACGC GCACGCGACC GTCACCTACG TGGTCGGCGC GGACGGCCTG TGCGTCGCCG CCAGCAACTG GCGCGCGCCC GACAGCTTCG TCGGGATCGA ATACCGCTTC CGTCCTTATT TCATCGACGC GATGAACGGC CGGGTCGGCC GCTTCTTCGG GATCGGCACG ATCTCGCGCG ACCCCGGCTA CTACATCTCG CAGCCGGTGC GGCGCGACGG CAAGATCGTG GGTGTCGTCG TCGTGAAACT CAATCTCGAA TGGTTCCAGG GCGCCGATGC GTCCGAACCG CTCGTCGTCG CGGACGATCA CGGCGTCGTG TTCCTGTCGT CCGTGCCCGC GTGGAAATAC CACACGCTGC ATCCATTGAC GGGGCCCGTC GCCGCGTCGA TCTACGAGAC GCGCCAGTAC GCGCAGCAGC CCGTCACGCC GCTGCCGCTG CGCGTCGAGC AGGTGCTCGG CGCGGACGCG GAGATCGTGC GCCTCGGCGC GGCCGGCGTA GGCCCGGGCC TGCGCGCACC GCGCTTCCTG GCCAGCAAGC GGCGGATCGG CGAACCCGAC TGGCTGCTCG TCACGCTCGC GCCGATCGCA CCGATCGACG CCGATGCGCG CAACGCGACC ATCGTCACGG GCTTCGGCTT CGTGTCGGTG GCGTTGCTCG CGTTCTACTG GCGCATGCGC CGCGCGCGCG TGCGCGAGAT GATCCGCGGC CGCGCGCTGC TGCAGCAGGC GTATGCGGAG CTGAACCGGC GCGTCGAGGA ACGCACGGCC GACCTGTCGG AGGCGAACGA GCAATTGCAG AAGGAAGTCG GCGACCGGAT CCGCGCGGAA CAGGAATTGC GCGCCGCGCA CGACGAACTG ATCCAGGCGA GCAAGCTCGC CGCGCTCGGC CAGATGGCGG CCGGCATCAC GCATGAACTG AACCAGCCGC TCGCGGCATT GCGCAGCTTC TCCGACAACA CGCGCGTGCT GCTCGATCGC GGCGAGCAGG CAGCCGCGCG CGAGAACCTC GAGGCGATCG CCGCGCTGAC CGAGCGGATG GGCAAGATCA CCAACCAGCT GAAGCTGTTC GTCGGCCGCG CGAAGCCGCG CAACGAACAG GCGCTGGTCG TGCGCGCGCT GCGCAGCGTG CTGTCGCTGC TCGGCGAGCG GCTGCGCGGC GTCGCCCTCA CGCTGACGCT GCAGGATGCG ACCGTGTCGC CCGCGCAGGA TGCGCCGCTC GACCTCGCGC GCGACTATCC GGACCTCGTC GCCCGCTGCG AGGACCTGCG CCTCGAACAG GTGCTGATCA ACCTGCTCGG CAACGCGCTC GACGCGGTCG CGGGTGTCAC GGCGCCGGCG ATCGAAGTGA CGATCGCGGT GTCGGTCGCG ACGCTGGCGG TCGAGGTGCG CGACAACGGC CCGGGTATCG CGCCCGACCT GCTGCCGCGC TTGTTCGAAC CGTTCTTCAC AACCAAGGAA ATGGGGCGCG GGCTCGGGCT CGGCCTCGCG ATCTCGTCGT CGATCGCGAG CGACGCGGGC GGCGCGCTGA CCGCGCGCAA TGCGCCGTCC GGCGGCGCGC TGTTCGTCTT GACGCTGCGG CGCACGCGCA CGCATCATCC GGACTCCCTG TCCGAGCCGG CGGGCTCGCG CTAG
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Protein sequence | MNEQAAVPPA AAAPRGGPGG RAGDAEPYDT IGDPHRQEVT SVKRRLLILV VLAVALAAAC ALTWTITWRR GVAELQRNAA VRVDRTTNAL KSTLDRYESL PYLLGSHPYV QDLLAEPKRT DFTGRANRYL EDLNEHAHAT VTYVVGADGL CVAASNWRAP DSFVGIEYRF RPYFIDAMNG RVGRFFGIGT ISRDPGYYIS QPVRRDGKIV GVVVVKLNLE WFQGADASEP LVVADDHGVV FLSSVPAWKY HTLHPLTGPV AASIYETRQY AQQPVTPLPL RVEQVLGADA EIVRLGAAGV GPGLRAPRFL ASKRRIGEPD WLLVTLAPIA PIDADARNAT IVTGFGFVSV ALLAFYWRMR RARVREMIRG RALLQQAYAE LNRRVEERTA DLSEANEQLQ KEVGDRIRAE QELRAAHDEL IQASKLAALG QMAAGITHEL NQPLAALRSF SDNTRVLLDR GEQAAARENL EAIAALTERM GKITNQLKLF VGRAKPRNEQ ALVVRALRSV LSLLGERLRG VALTLTLQDA TVSPAQDAPL DLARDYPDLV ARCEDLRLEQ VLINLLGNAL DAVAGVTAPA IEVTIAVSVA TLAVEVRDNG PGIAPDLLPR LFEPFFTTKE MGRGLGLGLA ISSSIASDAG GALTARNAPS GGALFVLTLR RTRTHHPDSL SEPAGSR
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