| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2788 |
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| Symbol | |
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| ID | 6176183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3087897 |
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| End bp | 3089252 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682565 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001809481 |
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| Protein GI | 172061829 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACC GGCTGCAAGT GATCTATATC GAAGACGACG CGCTCGTTCG CCGGGCAAGC
GTGCAGAGCC TCCAGCTCGC GGGGTTCGAC GTCGTCGGGT TCGAATCGGC CGAGGCGGCC
GACAAGGCGA TCGTCGCGGA AACCGCCGGC GTGATCGTCA GCGACATCCG GCTGCCCGGG
GCGAGCGGGC TCGACCTGCT CGCGCAGTGC CGCGAGCGCG TGCCCGACGT GCCGGTGATC
CTCGTCACCG GTCACGGCGA CATCTCGATG GCCGTGCAGG CAATGCGCGA CGGCGCGTAC
GACTTCATCG AAAAGCCGTT CGCGGCCGAA CGGCTGATCG AGACCGTGCG CCGCGCGCTC
GAGCGGCGCG AACTCGTGCT CGAGAACCAC GCGCTGCGGC GCGAGCTGGC CGGGCAGAAC
ATCGTCGCGC CGCGCATCAT CGGCCGCAGC CCGGCGATCG AACAGGTGCG CAAGCTGATC
GCGAACGTCG CGCCCACCGA CGCCTCGGTG CTGATCAACG GCGACACGGG CGCCGGCAAG
GAGCTGATCG CGCGCAGCCT GCACGAGCTG TCGCCGCGGC GCGACAAGCC GTTCATCGCG
GTGAACTGCG GCGCGCTGCC CGAGCCGATG TTCGAGTCGG AGATGTTCGG CTACGAGCCC
GGCGCGTTTA CGGGGGCCGC GAAGCGCCGC GTCGGCAAGC TCGAATATGC GTCCGGCGGC
ACGCTGTTCC TCGACGAAAT CGAAAGCATG CCGCTCGCGC TGCAGGTAAA GCTGCTGCGC
GTGCTGCAGG ACGGCGTGCT CGAGCGGCTC GGCTCGAACC AGCCGATCCG CGTGAACTGC
CGCGTCGTCG CGGCCGCGAA GGGCGACATG AGCGAGCTCG TCGCGGCCGG CACGTTCCGG
CGCGACCTGC TGTACCGCCT CAATGTGGTG ACGATCGCGC TGCCGCCGCT CGCCGAGCGC
CGCGAGGACA TCGTGCCGCT GTTCGAGCAC TTCATGCTCG ACGCGGCCGT GCGCTACGGG
CGGCCGGCCC CGGTGCTGAC CGACCGGCAG CGCGCGAGCC TGATGCAGCG CGACTGGCCC
GGCAACGTGC GCGAGCTGCG CAACGCGGCG GACCGCTTCG TGCTCGGCGT CGCCGACATG
CCGCAGGATG CGGGCGCGAG CGGCGACGAT GCCGAGAGCG ACCAGACGCT GAAGGAGCGC
ATCGAGCAGT TCGAGCGTGC GGTGATTGCG CAGGCGCTGA ACCAGACGGG CGGCGCGGTC
GCCGCGACGG CCGACCGGCT GCATGTCGGC AAGGCGACGC TGTACGAGAA GATGAAGCGC
TACGGGCTGT CGGCGAAAGG CGAAACCGAG CGCTGA
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| Protein sequence | MANRLQVIYI EDDALVRRAS VQSLQLAGFD VVGFESAEAA DKAIVAETAG VIVSDIRLPG
ASGLDLLAQC RERVPDVPVI LVTGHGDISM AVQAMRDGAY DFIEKPFAAE RLIETVRRAL
ERRELVLENH ALRRELAGQN IVAPRIIGRS PAIEQVRKLI ANVAPTDASV LINGDTGAGK
ELIARSLHEL SPRRDKPFIA VNCGALPEPM FESEMFGYEP GAFTGAAKRR VGKLEYASGG
TLFLDEIESM PLALQVKLLR VLQDGVLERL GSNQPIRVNC RVVAAAKGDM SELVAAGTFR
RDLLYRLNVV TIALPPLAER REDIVPLFEH FMLDAAVRYG RPAPVLTDRQ RASLMQRDWP
GNVRELRNAA DRFVLGVADM PQDAGASGDD AESDQTLKER IEQFERAVIA QALNQTGGAV
AATADRLHVG KATLYEKMKR YGLSAKGETE R
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