| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2764 |
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| Symbol | |
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| ID | 6176989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3064901 |
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| End bp | 3066508 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682541 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001809457 |
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| Protein GI | 172061805 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.802533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTT TGGGTAAGGA TGCTATGAAA ACAATCAAGC GAGCCCTCAC GGGCGTGCTG
GCATGCAGCG GATTGCTCTT TGCCGGCGCT GCTCTGGCGG TCGGTGATAG CCCGGGCGGC
CCCCGCGTCA ACGAGATCAA CTTTCAGCCG CCGGTCACGA AGATCGCCGA GGAGCTCTAC
GATCTCCACA CGATGATGCT GATCCTGTGT ACGGTGATCT TCGTCGGCGT GTTCGGCGTG
ATGTTCTATT CGATCTTCGC GCACCGCAAA TCCAAAGGCC ACAAGGCCGC CAATTTCCAT
GAAAGCACGA CCGTCGAGAT CATCTGGACG ATCGTGCCGT TCGTCATCGT CGTGCTGATG
GCGCTGCCGG CCACGAAGGC CGTCGTCGCG ATGAAGGACA CGACCAACGC CGATCTCACG
ATCAAGGTCA CCGGCTACCA GTGGAAGTGG GGCTACGACT ACGTGAAGGG CCCGGGCGAG
GGCATCGGCT TCCTGTCGAC GCTCAGCACG CCGCGTGACG AAGTGATGGG CAAGAAGCCG
ATCACCGAAA CCTACCTGCA GGAAGTCGAC AACCCGCTCG TCGTGCCGGT CAACAAGAAG
ATCCGCATCA TCACGACCGC GAACGACGTC GTTCACTCGT GGTACGTGCC CGCATTCGGC
GTGAAGCAGG ATGCGATCCC CGGCTTCGTG CGCGATACGT GGTTCAAGGC CGACAAGGTC
GGCACGTTCC GCGGCTTCTG TACCGAGCTG TGCGGCAAGG AACACGCGTT CATGCCGGTC
GTAGTCGTTG TGCTGTCGGA CGACGACTAC GCGAAGTGGG TCACCGCGCA GAAGGCCAAG
CTGGCCGGCG CGGCGGTCGA TCCGAACAAG GTCTACACGA TGGCCGAACT CGTCTCGCAC
GGCGAGGAAG TCTACAAGGC GAACTGCGCG GCCTGCCACC AGGTGAGCGG CAAGGGCCTC
GGCGCATTCC CGGCGATGGA CGGCAGCCCG ATCGTGAACG GCCCGATCGC CGGCCACGTC
GAGCGCGTGC TGCACGGCAA GGGCGCGATG CCGTCGTGGG CGTCGCTGTC GGACCTCGAC
ATCGCATCGG TCGTCACGTA CGAGCGCAAC TCGTGGGGCA ACCACAAGAA CGATCTGCTG
CAGCCGAAGC AAGTGGCTGA CGCGCGCAAC GGCAAGATGC CGGAAGACGC GGCAGGCGCC
GCGGCACCGG CCGAAGCGGC CTCGGCACCG GCGCAAGCCG CGTCGGGCGC GGCCGAGCAG
TCGGCGGCGG CATCGGCGGC GGCGCCGGCA TCGACCGCGC TGTCGACGGT CTACTTCGAA
ACGGGCAAGA GCGTGCTGCC GGCCGACGCG AAGGCGGCGA TTGCCGCAGC GGCCGACTAT
GCGAAGGCAC ATCCGGACGC GAAGCTCGCG CTGTCGGGTT TCACCGACAA GACGGGCTCG
GCCGACGCGA ACGCCGAACT CGCCAAGCAT CGTGCACAGG TCGTGCGCGA CGCGCTGAAG
GCAGCAGGCG TGGCGGAAGA CCACATTATT CTCAAAAAGC CGGAAACGAT CACGGGCGGG
GCTGACGCGA AGGAAGCCCG GCGAGTCGAG ATCGGGCCGG CGGCTTGA
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| Protein sequence | MEILGKDAMK TIKRALTGVL ACSGLLFAGA ALAVGDSPGG PRVNEINFQP PVTKIAEELY
DLHTMMLILC TVIFVGVFGV MFYSIFAHRK SKGHKAANFH ESTTVEIIWT IVPFVIVVLM
ALPATKAVVA MKDTTNADLT IKVTGYQWKW GYDYVKGPGE GIGFLSTLST PRDEVMGKKP
ITETYLQEVD NPLVVPVNKK IRIITTANDV VHSWYVPAFG VKQDAIPGFV RDTWFKADKV
GTFRGFCTEL CGKEHAFMPV VVVVLSDDDY AKWVTAQKAK LAGAAVDPNK VYTMAELVSH
GEEVYKANCA ACHQVSGKGL GAFPAMDGSP IVNGPIAGHV ERVLHGKGAM PSWASLSDLD
IASVVTYERN SWGNHKNDLL QPKQVADARN GKMPEDAAGA AAPAEAASAP AQAASGAAEQ
SAAASAAAPA STALSTVYFE TGKSVLPADA KAAIAAAADY AKAHPDAKLA LSGFTDKTGS
ADANAELAKH RAQVVRDALK AAGVAEDHII LKKPETITGG ADAKEARRVE IGPAA
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