Gene BamMC406_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2759 
Symbol 
ID6175993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3061172 
End bp3062029 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID641682536 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001809452 
Protein GI172061800 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.599225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC AAAACCAGAC CCCGTACTAT TTCGTGCCGC ATCCGTCGCA GCATCCGATC 
AGCGCGGCCG TCGGCCTGCT GGTCATGCTC GGATCGGTGG CGCTGTGGAT CAACGGTCAC
GACTGGGCGC CGTACACGGC GCTGCTCGGC CTGCTGTGGT TGCTCTTCAC GCTGTATCAC
TGGTTCGGCG ACGCGATCGC CGAGTCGGAA GGCGGTCATT ACGGCAAGAA CGTCGACAAG
TCGTACCGCT GGAGCATGAG CTGGTTCATC TTCTCGGAAG TCATGTTCTT CGGCGCGTTC
TTCGGTGCGC TGTTCTATGC GCGTGAAATC GCGCTGCACC AGCTCGGCAG CCTCGACTAC
AAGCTGATCT GGCCGGATTT CTCCGCCGTG TGGCCGAACG AAGGCCCCGC CGCGCTCGCC
GGTCACTTCA AGACGATGGG CCCGTGGCCG ATCCCGACGC TGAACACCGC GTTCCTGCTG
TCGTCGGGCG TGACGCTGAC GATCTCGCAC CACGCGCTGC GCGACGATTA CCGCAAGAAG
GCGATCGCCT GGCTGGCCGC GACGCTCGCG CTCGGTATCT GCTTCCTGTT CCTGCAGGGC
TTCGAGTACT ACCACGCGTA CAACGAACTG AACCTGACGC TGAATTCGGG CGTGTACGGC
TCGACGTTCT TCCTGCTGAC GGGCTTCCAC GGCTTCCACG TGTTCCTCGG CGGCACGATG
CTCGCGGTGG TGCTGGTGCG GATGATCCGC GGCCACTTCA AGCCGGATCA CCACTTCGCA
TTCGAAGGCG CTGCGTGGTA CTGGCACTTC GTCGACGTCG TCTGGCTCGG CCTGTACGTC
GTCGTCTACT GGCTGTAA
 
Protein sequence
MSGQNQTPYY FVPHPSQHPI SAAVGLLVML GSVALWINGH DWAPYTALLG LLWLLFTLYH 
WFGDAIAESE GGHYGKNVDK SYRWSMSWFI FSEVMFFGAF FGALFYAREI ALHQLGSLDY
KLIWPDFSAV WPNEGPAALA GHFKTMGPWP IPTLNTAFLL SSGVTLTISH HALRDDYRKK
AIAWLAATLA LGICFLFLQG FEYYHAYNEL NLTLNSGVYG STFFLLTGFH GFHVFLGGTM
LAVVLVRMIR GHFKPDHHFA FEGAAWYWHF VDVVWLGLYV VVYWL