| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2750 |
|---|
| Symbol | |
|---|
| ID | 6176538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3053413 |
|---|
| End bp | 3054228 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641682527 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_001809443 |
|---|
| Protein GI | 172061791 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC GCAGTCTCCT GAAGGTATTT TCCGTGCTGG CCACCGGCGC CGCGCTGACG
CTGTCGGCGG GCGCGCACGC CGAAGACAAG GTGATCAAGG TCGGCACGGT GGCCGGTCCG
GATTCGGAAG TGTGGCAGGT CGTGCAGAAG GTCGCGAAGG AGAAGCAAGG CCTGAACGTG
AAGGTCGTCG AGTTCAACGA CTACGTGCAG CCGAACGCGG CGCTCGATTC GGGCGACCTC
GACGCGAACA GCTTCCAGCA CCAGCCCTAC CTTGACAGCC AGGTGAAGCA GCGCGGCTAC
AAGCTCGTCA CCGCGGGCCT GACCTACATC TCGCCGATCG GCGTGTACTC GAAGAAGTTC
AAGTCGCTGA AGGACCTGCC GCAAGGCGCG AAGCTCGCGG TGCCGAACGA TCCGTCGAAC
GAGAACCGCG CGCTGCTGCT GCTGCAGACG CAAGGCGTGA TCAAGCTGAA GGCGGGCGCC
GGCACGGGCG GCAACAACGC GACGGTGCTC GACATCGCCG AGAACCCGAA GAAGCTGAAG
ATCTCCGAGC TCGACGCCGC GCAACTGCCG CGCGTGCTGT CGGACGTCGA CGCGGCCGTG
ATCAACACGA ACTACGCGCT CGCCGCCAAC CTGCAGCCGA CCAAGGACGC GATCGCGCTC
GAATCGCTGA CGAGCCCGTA CGCGAACGTG ATCGCCGTGC GCGCGAAGGA CAAGGACCAG
CCGTGGGTGA AGAAGCTGGT CAAGGCGTAT CAGTCGCCGG AAGTGCGGGA ATTCATCAAG
AAGCAGTTCA AGGGCTCGAT GGTCGCGTCG TTCTGA
|
|---|
| Protein sequence | MKRRSLLKVF SVLATGAALT LSAGAHAEDK VIKVGTVAGP DSEVWQVVQK VAKEKQGLNV
KVVEFNDYVQ PNAALDSGDL DANSFQHQPY LDSQVKQRGY KLVTAGLTYI SPIGVYSKKF
KSLKDLPQGA KLAVPNDPSN ENRALLLLQT QGVIKLKAGA GTGGNNATVL DIAENPKKLK
ISELDAAQLP RVLSDVDAAV INTNYALAAN LQPTKDAIAL ESLTSPYANV IAVRAKDKDQ
PWVKKLVKAY QSPEVREFIK KQFKGSMVAS F
|
|---|
| |