Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2743 |
Symbol | |
ID | 6176443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3045200 |
End bp | 3045934 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682520 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001809436 |
Protein GI | 172061784 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.927097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCG GCTGGTCCGA ACTGGCGCCC GATCCCCTCG ACGACACGCC GCTGTATCTG CAGCTCGCCC GCAACCTGGC GAGCGCGATT CACGCCGGCG CGTGGCGGGC CGGAGAGGCG CTGCCGTCGG AGCGGCTGCT GTCGGGGTCG GTCGGCGTAT CGCGGATCAC GGCCCGCCGT GCGCTCGCGC TGCTGGTCGA GCAGGGGCTG ATCAAGCGGG CGCGCGGCGC GGGCAGCTTC ATCACGCCGC GTGTCGCCGA TCCGCTGTCG CGTCTCGTCG GCTTCACCGC GAAGATGCAG CAGCGCGGCT TCGTGCCCGA TTCGGTGTGG CTGTCGCGCA CGCTGCGCGC CGCGAGCCGC GACGAGATCA CGCATCTCGG CCTCGCGCCC GGCGCGACGG TCGCCCGGCT CGAACGGCTG CGCCGCGCGG ACGGCATCGT GATGGCCGTC GAGCATTCGA CGCTGCCGGC CGCGGTGGTG CCCGATCCGC TGGCGCTCGG CGCGTCGCTG TACGAATACC TCGACGCGCG CGGGATGACT GTCGTGCGCG CGCTGCAGCA CTTTCGCGCG GCGAACGCGA CGCACGAGAT CGCGAAGTGG ATGGCGGTGA AGCCGGGCTC GGCCCTGCTC GTGATCACGC GCATCGGCTA CGGCGTCGAC CAGCGCGCGA TCGAAGTGAC CGAAACGTAT TGCCGCGACG ACTATTACGA CTTCGTCGCG GAACTGAAAC GCTGA
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Protein sequence | METGWSELAP DPLDDTPLYL QLARNLASAI HAGAWRAGEA LPSERLLSGS VGVSRITARR ALALLVEQGL IKRARGAGSF ITPRVADPLS RLVGFTAKMQ QRGFVPDSVW LSRTLRAASR DEITHLGLAP GATVARLERL RRADGIVMAV EHSTLPAAVV PDPLALGASL YEYLDARGMT VVRALQHFRA ANATHEIAKW MAVKPGSALL VITRIGYGVD QRAIEVTETY CRDDYYDFVA ELKR
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