| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2739 |
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| Symbol | |
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| ID | 6176998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3038507 |
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| End bp | 3040270 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682516 |
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| Product | PTS system, N-acetylglucosamine-specific IIBC subunit |
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| Protein accession | YP_001809432 |
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| Protein GI | 172061780 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGGA ATCCGTTTCT GAAGATACAG GGCCTGGGCC GGGCGCTGAT GCTGCCGATC
GCGGTGTTGC CGGTCGCCGG CATCCTGCTG CGGCTCGGGC AGCCCGATGT GTTCAACATC
AAGATGATCG CCGACGCCGG CGGTGCGATC TTCGACAACC TGCCGCTCCT GTTCGCGATC
GGCGTGGCGG TCGGTTTCGC GAAGGACAAC AACGGCGTGG CGGCGCTCGC GGGCGCGATC
GGCTACCTGA TCGAAACCGC GATCATGAAG GACATCGATC CCAAGCTGAA CATGGGCGTG
CTGTCCGGGA TCATCGCGGG CGTGGTCGCG GGGCTGCTGT ACAACCGCTA CAAGGACATC
AAGCTGCCGG ACTACCTCGC GTTCTTCGGC GGCAAGCGGT TCGTGCCGAT CATCACGGGG
CTCGCGTGCG TGATACTCGG CATCGTGTTC GGCTACGTGT GGCAGCCGGT CCAGCATGCG
ATCGACGCGG CCGGCCAGTG GCTCACGACG GCGGGCGCGA TCGGTGCGTT CGTGTTCGGC
TTCCTGAACC GCCTGCTGCT CGTCACGGGC CTGCACCACA TCATCAACTC GCTCGCGTGG
TTCGTGTTCG GCAACTTCAC GCCGCCGGCG GGCGGCGAGA TCGTGCACGG CGACCTGCAC
CGCTTCTTCG CGGGCGACCC GACCGCGGGC ACTTTCATGG CCGGCTTCTT CCCGATCATG
ATGTTCGGCC TGCCGGCCGC GTGTCTCGCG ATGCTGCACG AAGCGCCGAA GGAGCGCCGC
GCGATGGTCG GCGGCCTGCT GTTCTCGATG GCGCTCACGT CGTTCCTGAC CGGCGTGACC
GAGCCGATCG AATTCAGCTT CATGTTCCTC GCGCCGGTGC TGTACGTGAT CCACGCGGTG
CTCACGGGGC TGTCGCTCGC GATCTGCCAG CTGCTCGGCG TGAAGCTCGG CTTCACGTTC
TCGGCCGGCG CGATCGACTA CGTGCTGAAC TACGGGCTGT CGACGAAGGG CTGGATCGCG
ATTCCGCTCG GCATCGCGTA CGGTGTCGCG TACTACGGGC TGTTCCGCTT CTTCATCCGC
AAGTTCAACA TGGCGACGCC GGGCCGCGAG CCGGCCTCGG CCGATGCGGC GACCGAGTCG
TTCGCATCCG GCGGTTTCGT CGCACCGGCT GCGGGTGCCG CGGCGGCAGC GCCGCGTGCG
CTGCGCTACA TCGCCGCGCT CGGCGGGGCG GGCAACCTGA CGGTCGTCGA CGCATGCACG
ACGCGCCTGC GCCTGAGCGT CGTCGACCCG GAGAAGGTGT CGGAGCCTGA ACTGAAGTCG
ATCGGCGCGC GCGGCGTGCT CAAGCGCGGC GGCAACAGCG TGCAGGTGAT CATCGGGCCC
GAGGCCGACA TCATTGCCGA CGAGATGCGT TCGGCGATCG GCAGCGGCGC GAGCGGTGCC
GCGGCGCCGG TCACGGCCGC GGCCGCGCAG CCGGTCACGG GCGCGGCGGC CGGCCCGCTC
GATCCCGATC CGCTGCGCTG GCTCGCGGTG TTCGGCGGCG CGACCAACGT CGCAACGCTC
GACGCGATCG CGACCACGCG CCTGCGAGTC GTGGTGCGCG ACGCATCGGC GGTCGATCGT
GATCGCCTCG GTGCACTCGA CGTCGCATGG GTGTCGCCGG ACACGTTCCA CATCGTCTGC
GGCAACGCGG CGGCACGCTA CGCCGAACAG CTCGGCGCAC GTCTGCCGTC GACAGGCGGC
GGCGCGGCCG CGCAACCGGC CTGA
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| Protein sequence | MDGNPFLKIQ GLGRALMLPI AVLPVAGILL RLGQPDVFNI KMIADAGGAI FDNLPLLFAI
GVAVGFAKDN NGVAALAGAI GYLIETAIMK DIDPKLNMGV LSGIIAGVVA GLLYNRYKDI
KLPDYLAFFG GKRFVPIITG LACVILGIVF GYVWQPVQHA IDAAGQWLTT AGAIGAFVFG
FLNRLLLVTG LHHIINSLAW FVFGNFTPPA GGEIVHGDLH RFFAGDPTAG TFMAGFFPIM
MFGLPAACLA MLHEAPKERR AMVGGLLFSM ALTSFLTGVT EPIEFSFMFL APVLYVIHAV
LTGLSLAICQ LLGVKLGFTF SAGAIDYVLN YGLSTKGWIA IPLGIAYGVA YYGLFRFFIR
KFNMATPGRE PASADAATES FASGGFVAPA AGAAAAAPRA LRYIAALGGA GNLTVVDACT
TRLRLSVVDP EKVSEPELKS IGARGVLKRG GNSVQVIIGP EADIIADEMR SAIGSGASGA
AAPVTAAAAQ PVTGAAAGPL DPDPLRWLAV FGGATNVATL DAIATTRLRV VVRDASAVDR
DRLGALDVAW VSPDTFHIVC GNAAARYAEQ LGARLPSTGG GAAAQPA
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