| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2735 |
|---|
| Symbol | |
|---|
| ID | 6177469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 3032312 |
|---|
| End bp | 3033889 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641682512 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001809428 |
|---|
| Protein GI | 172061776 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.105689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGTA GCGAAGTCGT CGATCTGTCA CGTCTACAGT TCGGCATCAC GGCGCTCTAC
CACTTCCTGT TCGTGCCGCT GACGCTCGGC CTGTCCTGGC TGCTCGTCAT CATGGAAGCC
GTCTACGTGA TGACGGGCAA GCAGGTCTAC AAGGACATGA CCCAGTTCTG GGGCAAGCTG
TTCGGGATCA ACTTCGCGAT GGGCGTGACG ACCGGCATCA CGCTCGAATT CCAGTTCGGC
ACGAACTGGT CGTACTACTC GCACTACGTC GGCGACATCT TCGGCGTGCC GCTCGCGGTG
GAAGGGCTGA TGGCGTTCTT CCTCGAATCG ACGTTCGTCG GCCTGTTCTT CTTCGGCTGG
AACCGCCTGT CGAAGATCAA GCACCTGATG GTCACGTTCC TCGTCGCGCT GGGCTCGAAC
CTGTCCGCGC TGTGGATTCT CGTCGCGAAC GGCTGGATGA ACAACCCGGT CGGCGCGGCG
TTCAACTACC AGACGATGCG CATGGAGATG ACGAGCCTGT TCGACGTGCT GTTCAACCCG
GTCGCGCAGG TGAAGTTCGT GCACACCGTG TCGGCCGGCT ACGTGTCGGC GGCGATGTTC
GTGCTCGGCG TGTCGTCGTG GTACCTGCTG AAGAAGCGCG ACGTCGACTT CGCGCTGCGC
TCGTTCGCGG TCGCGGCCGG CTTCGGCCTC GCGGCGACGC TCTGCGTGAT CGTGCTCGGC
GACGAATCGG GCTATACGAC CGGCGAAGTG CAGAAGATGA AGCTCGCCGC GATCGAATCC
GAATGGGATA CGCAGCCGGC ACCCGCGTCG TTCACGCTGA TCGGCATTCC CAACCAGGAA
GAGCAGCGCA CCGACTATGC GATCAAGATC CCGTACGCGC TCGGCCTGAT CGCGACGCGC
TCGATCGACG AACCGGTGAT CGGCCTGCGC GAGCTCGCGA AGCGCAGCGA GGAGCACATC
CAGAGCGGGA TGGTCGCGTA CGGCGCGCTG CAGAAGATCA AGCAGGGCGA CACGAGCGAG
GCGACCCGCG CGTCGTTCGA CCAGCACAAG CAGTATCTCG GCTACGGGCT GATGCTCAAG
CAGTTCACGC CGAACGTGAC GGACGCGACG CCCGAGCAGA TCAAGGCCGC CGCGAAGAAG
ACGATCCCGC CGGTCGCGCC CGTGTTCTTC TCGTTCCGGA TCATGGTGGC CCTCGGCTTC
CTGTTCGTCG CGACGTTCGT TGCCGCGTTC TGGTTCTGCG CGCGCCGCGA GCTGCTGCAG
GACAACCGCC GCTGGTTCCT CCGCTATGCG GTGTGGGCGA TTCCGCTGCC GTGGATCGCG
ATCGAATTCG GCTGGATCGT CGCCGAGCTC GGCCGCCAGC CGTGGACGAT CGCCGGCGTG
CTGCCGACGC ATCTGTCGGC GTCGAGCCTG CAGCCGAGCG ACCTGTACCT GAGTCTCGCC
GGCTTCATCC TGTTCTACAC CGCGCTGTTC GTCATCGAGA TCAAGCTGAT GTTCAAGTAC
GCGCGCCTCG GCCCGTCGTC GCTGCATACC GGCCGCTATC ACCACGAAAT CGCCGCCGGC
GAGCGTGCCA CGGTTTGA
|
|---|
| Protein sequence | MISSEVVDLS RLQFGITALY HFLFVPLTLG LSWLLVIMEA VYVMTGKQVY KDMTQFWGKL
FGINFAMGVT TGITLEFQFG TNWSYYSHYV GDIFGVPLAV EGLMAFFLES TFVGLFFFGW
NRLSKIKHLM VTFLVALGSN LSALWILVAN GWMNNPVGAA FNYQTMRMEM TSLFDVLFNP
VAQVKFVHTV SAGYVSAAMF VLGVSSWYLL KKRDVDFALR SFAVAAGFGL AATLCVIVLG
DESGYTTGEV QKMKLAAIES EWDTQPAPAS FTLIGIPNQE EQRTDYAIKI PYALGLIATR
SIDEPVIGLR ELAKRSEEHI QSGMVAYGAL QKIKQGDTSE ATRASFDQHK QYLGYGLMLK
QFTPNVTDAT PEQIKAAAKK TIPPVAPVFF SFRIMVALGF LFVATFVAAF WFCARRELLQ
DNRRWFLRYA VWAIPLPWIA IEFGWIVAEL GRQPWTIAGV LPTHLSASSL QPSDLYLSLA
GFILFYTALF VIEIKLMFKY ARLGPSSLHT GRYHHEIAAG ERATV
|
|---|
| |