| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2730 |
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| Symbol | |
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| ID | 6177107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3027631 |
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| End bp | 3029277 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682507 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001809423 |
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| Protein GI | 172061771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA ACCCGCAAGA CAAGTACCGT CCGTTCGAAC CCGTCCGCCT CAATGGCCGC
CGCTGGCCGA CCCGCACCAT CGAGCGTGCG CCGGTCTGGA TGAGCACCGA CCTGCGCGAC
GGCAACCAGT CGCTGATCGA GCCGATGAGC ATCGAGCAGA AGCTGGAATT CTTCGACATG
CTGGTTGCGA TCGGTTTCAA GGAAATCGAA GTCGGCTTTC CGTCGGCGTC GCAAACCGAC
TTCGATTTCG TCCGCAAGCT GATCGACGAC AAGCGCATCC CCGACGACGT GACGATCGAA
GTGCTCGTGC AGTCGCGCGA AGACCTGATC GCGCGCACCT TCGACGCGCT CGATGGCGTG
CCGCGCGCGA TCGTGCACCT GTACAACGCG ATCTGCCCGT CGTTCCGCCG CATCGTGTTC
GGGATGTCGA AGGACGACGT GAAGGCACTC GCGGTCGACG GCACGCGGCT CATCAAGGAA
CATGCGGCGG CCCGTCCGGA CACGCACTGG ACCTACCAGT ACTCGCCGGA AACCTTCAGC
ATGACCGAAC TGACGTTCGC GCGCGAAGTG TGCGACGCGG TCGCGCAGGC ATGGCGGCCG
ACCCGCGATC ACAAGATGAT CGTCAATCTG CCGGCGACCG TCGAAGCCGC GAGCCCGAAC
GTGTTCGCCG ACCAGATCGA GTGGATGGAC CGCAATCTCG CGTATCGCGA CAGCATCGTG
CTGTCCGTGC ATCCGCACAA CGATCGCGGC ACCGCGGTCG CGGCCGCCGA ACTCGCGCTG
CTCGCGGGCG CCGACCGCAT CGAGGGCTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC
GTCGATCTCG TCACGCTCGC GCTGAACCTC TATACGCAGG GCATCGACCC GGGCCTCGAT
TTCTCCGACA TCGACGCGGT GCGCCGCGTG GTCGAGCGCT GCAACCAGAT TCCGGTGCAT
CCGCGCCATC CGTACGCGGG CGACCTCGTG TTCACCGCAT TCTCCGGCTC GCACCAGGAC
GCGATCCGCA AGGGTTTCGC GCAGCAGCGG CCCGACGCGG TGTGGGAAGT GCCGTACCTG
CCGATCGACC CGGCCGACCT CGGCCGCAGC TATGACGCAG TGATCCGCGT GAACAGCCAG
TCCGGCAAGG GCGGCGCGAC GTTCCTGCTC GAACGCGGGA TGGGCTTCAC GCCGACGCGC
CGCGTGCAGA TCGAATTCAG CCACGCGGTG CAGACGCTCG CCGACGCGTC CGGCGAGGAA
GTGACCGGCG ATGCGATCTG CGCGCTGTTC GCCCGCGAAT TCTTCGAGAC CGCCGGCCCG
GCCGCGCGCC ACGGTGACGC CGCGCGCTGG CAGAACCGCG ACATCGCGGC TGCGCCGCCG
GCCGACGCGA CGCCCGAAGA TGCCGTGCAA TGGATGGCCG CGGCCTTCGC GACGGCAGCC
GGCGCGACGA TCGACGTCGC GTCGTGCGAA CACGCGCGCA CGACGGACGG CAGGATCGCG
GTATCGGTCG GCTGCCGGAT CGGCGATGCG CCGCTGCGGC ATGGCGTCGG CGTGCACGCC
GATGCGGCGA GCGCGGCGCT CGACGCGGTC GTCAGCGCAA TCAACCGCTC GGGCTGGCAT
TGCGCCGACC GACGCGCGGC GGCCTGA
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| Protein sequence | MKRNPQDKYR PFEPVRLNGR RWPTRTIERA PVWMSTDLRD GNQSLIEPMS IEQKLEFFDM
LVAIGFKEIE VGFPSASQTD FDFVRKLIDD KRIPDDVTIE VLVQSREDLI ARTFDALDGV
PRAIVHLYNA ICPSFRRIVF GMSKDDVKAL AVDGTRLIKE HAAARPDTHW TYQYSPETFS
MTELTFAREV CDAVAQAWRP TRDHKMIVNL PATVEAASPN VFADQIEWMD RNLAYRDSIV
LSVHPHNDRG TAVAAAELAL LAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGIDPGLD
FSDIDAVRRV VERCNQIPVH PRHPYAGDLV FTAFSGSHQD AIRKGFAQQR PDAVWEVPYL
PIDPADLGRS YDAVIRVNSQ SGKGGATFLL ERGMGFTPTR RVQIEFSHAV QTLADASGEE
VTGDAICALF AREFFETAGP AARHGDAARW QNRDIAAAPP ADATPEDAVQ WMAAAFATAA
GATIDVASCE HARTTDGRIA VSVGCRIGDA PLRHGVGVHA DAASAALDAV VSAINRSGWH
CADRRAAA
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