Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2718 |
Symbol | lolB |
ID | 6178968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3016946 |
End bp | 3017551 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641682494 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_001809411 |
Protein GI | 172061759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000827751 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.448755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCCC TGTCTTCCCG CGCGCTGCGC ACGCTGGCCG CGGCCGGCGC GGCGCTCGCG CTCGCCGGCT GCGCGAGCAC GCCGCCGTCG GCGAACGCGC CGGCCGGCGC CCCATTGCAG ACGGCCGCGA CGCATGCATA CCATGGCCGC TTCGCGGTGC AGTACAACGA CCGCCTCGGC AGGCAGCAAA ACGTGTACGG CAACTTCGAC TGGCTCGAGC ACGGCGACGA CGTGTCGCTC GAGCTGCGCA GCCCGCTCGG CCAGACGCTG GCAATCGTGA AATCGACGCC GCAGACCGCA ACGCTCGAAC TGCCGAACCG CCAGCCGCAA TACGCGACCG ACGTTGGCGA GCTGATGCAG AACACGCTCG GCTTCTCGCT GCCGCTGGCC GGCCTGCGCT ACTGGCTGCT GCCGACGCCC GCGCCCGCGA CGCCCGCGCA GACGGTACGC GACCCGGCCG ACACGACGCA CGTGAAGCAG ATTCGCCAGG ACGGCTGGAC GATCGATTAC CTCGCCTACG CGGACGCACC GGCCACCGGC GTCAAACGCG TGAACCTCGT GCGCGCGACG CCGCCGCTCG ACATCAAGCT CGTGCTCGAC CAGTAA
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Protein sequence | MLSLSSRALR TLAAAGAALA LAGCASTPPS ANAPAGAPLQ TAATHAYHGR FAVQYNDRLG RQQNVYGNFD WLEHGDDVSL ELRSPLGQTL AIVKSTPQTA TLELPNRQPQ YATDVGELMQ NTLGFSLPLA GLRYWLLPTP APATPAQTVR DPADTTHVKQ IRQDGWTIDY LAYADAPATG VKRVNLVRAT PPLDIKLVLD Q
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