Gene BamMC406_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2716 
Symbol 
ID6178886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3014194 
End bp3015021 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID641682492 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001809409 
Protein GI172061757 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.371452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.175182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGT TGCCAGAAGT CGAAGTCACG CGCCGGGGCA TCGAGCCCTT TGTCGCGGGC 
CGCCGCGTCG AGCGTGTCGA CGTCCGTACC GCGATGCTGC GCTGGCCCGT GCCGGCGGGG
CTCGCGGAGC AATTGCGCGC GCGCGAGGTG CTCGCCGTCG AGCGTCGCGG CAAGTACCTG
CTGTTCGAGG TCGACGCGGG CTGGTTCATC GTGCATCTCG GCATGACGGG CACGCTGCGC
GTGCTGCCCG CGGCCGGCGT GCCGGTCGCC GCTAAACACG ACCACATCGA CTGGATCTTC
GACGAGTTCG TGCTGCGCTT TCGCGATCCG CGCCGCTTCG GCGCCGTGCT GTGGCACGCG
CGCGAAGCGG GCGACGTGCA TGCGCATCCG CTGCTCGCGA GCCTCGGCGT CGAGCCGTTC
TCGCCGGCGT TCACCGGCGC GCTGCTGCAC GCGCGCACGC GCGGGCGCAC GGTGTCGGTC
AAGCAGGCGC TGCTCGCGGG CGACATGGTC GTCGGCGTCG GCAACATCTA TGCGTCGGAG
AGCCTGTTTC GCGCCGGCAT CCGGCCGACG ACCGCCGCCG GCAAGGTATC GCTGCCGCGC
TACGAGCGAC TGGCCGACGC GGTGCGCGCG ACGCTCGCCG ACGCGATCGA GCGCGGCGGC
AGCACGTTGC GCGACTTTGT CGGCAGCAAC GGCGAAAGCG GCTATTTCCA GCTCGACTGC
TTCGTCTACG ACCGTGCGGG GCTGCCTTGC CGCGTATGCG GCACGCCGAT CCGCCAGATC
GTGCAGGGCC AGCGCTCGAC CTATTTCTGC CCGACCTGCC AGCGTTGA
 
Protein sequence
MPELPEVEVT RRGIEPFVAG RRVERVDVRT AMLRWPVPAG LAEQLRAREV LAVERRGKYL 
LFEVDAGWFI VHLGMTGTLR VLPAAGVPVA AKHDHIDWIF DEFVLRFRDP RRFGAVLWHA
REAGDVHAHP LLASLGVEPF SPAFTGALLH ARTRGRTVSV KQALLAGDMV VGVGNIYASE
SLFRAGIRPT TAAGKVSLPR YERLADAVRA TLADAIERGG STLRDFVGSN GESGYFQLDC
FVYDRAGLPC RVCGTPIRQI VQGQRSTYFC PTCQR