Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2716 |
Symbol | |
ID | 6178886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3014194 |
End bp | 3015021 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641682492 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001809409 |
Protein GI | 172061757 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.371452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.175182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAGT TGCCAGAAGT CGAAGTCACG CGCCGGGGCA TCGAGCCCTT TGTCGCGGGC CGCCGCGTCG AGCGTGTCGA CGTCCGTACC GCGATGCTGC GCTGGCCCGT GCCGGCGGGG CTCGCGGAGC AATTGCGCGC GCGCGAGGTG CTCGCCGTCG AGCGTCGCGG CAAGTACCTG CTGTTCGAGG TCGACGCGGG CTGGTTCATC GTGCATCTCG GCATGACGGG CACGCTGCGC GTGCTGCCCG CGGCCGGCGT GCCGGTCGCC GCTAAACACG ACCACATCGA CTGGATCTTC GACGAGTTCG TGCTGCGCTT TCGCGATCCG CGCCGCTTCG GCGCCGTGCT GTGGCACGCG CGCGAAGCGG GCGACGTGCA TGCGCATCCG CTGCTCGCGA GCCTCGGCGT CGAGCCGTTC TCGCCGGCGT TCACCGGCGC GCTGCTGCAC GCGCGCACGC GCGGGCGCAC GGTGTCGGTC AAGCAGGCGC TGCTCGCGGG CGACATGGTC GTCGGCGTCG GCAACATCTA TGCGTCGGAG AGCCTGTTTC GCGCCGGCAT CCGGCCGACG ACCGCCGCCG GCAAGGTATC GCTGCCGCGC TACGAGCGAC TGGCCGACGC GGTGCGCGCG ACGCTCGCCG ACGCGATCGA GCGCGGCGGC AGCACGTTGC GCGACTTTGT CGGCAGCAAC GGCGAAAGCG GCTATTTCCA GCTCGACTGC TTCGTCTACG ACCGTGCGGG GCTGCCTTGC CGCGTATGCG GCACGCCGAT CCGCCAGATC GTGCAGGGCC AGCGCTCGAC CTATTTCTGC CCGACCTGCC AGCGTTGA
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Protein sequence | MPELPEVEVT RRGIEPFVAG RRVERVDVRT AMLRWPVPAG LAEQLRAREV LAVERRGKYL LFEVDAGWFI VHLGMTGTLR VLPAAGVPVA AKHDHIDWIF DEFVLRFRDP RRFGAVLWHA REAGDVHAHP LLASLGVEPF SPAFTGALLH ARTRGRTVSV KQALLAGDMV VGVGNIYASE SLFRAGIRPT TAAGKVSLPR YERLADAVRA TLADAIERGG STLRDFVGSN GESGYFQLDC FVYDRAGLPC RVCGTPIRQI VQGQRSTYFC PTCQR
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