| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2707 |
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| Symbol | |
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| ID | 6178961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3005767 |
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| End bp | 3006432 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682483 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_001809400 |
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| Protein GI | 172061748 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0137528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC CGTTCCCTCG ACAGAATTCC GGCGGCGCTG CGCGCGCCGT CCGCGCCGCG
CTCGCCGCGA CGCTCGTGGC GCTCCCGCTC ATCGGGCTGG CGCCGCTCGC CCATGCCGAG
AAGGCTGACC AGAACAAGCC GATCAACGTC GAGGCGGACA ACCTCACCTA CGACGACCTG
AAGCAGGTGA CGGTCGCGAC CGGCAACGTC GTGATCACGA AGGGCACGAT CATCATCAAG
GGCGATCGCG TCGAAGTGCG CCAGGATCCG GAAGGCTATC AGTACGCGAC GTCGTTCGGC
AGCGGCAAGA AGCACGCGAC GTTCCGCCAG AAACGCGAAG GTCTCGACGA GTACATCGAC
GGCGACGCCG AGCGCATCGA CTACGACGGC AAGCAGGATC TGACGACCCT GACGACCGCC
GCGACCGTGC GCCGCCTGCA GGGCACGTCG ACGATCGCCG ACACCGTGCA CGGCAGCGTG
ATCACGTACG ACGGCCAGCG CGACTTCTAC ACCGCGAAGG GCGGCAAGGA CGTCGCGGCG
CCGGGCAATC CGAACGGCCG CGTGCGCGCG ATGCTGTCGC CGAAGAGCGG CGGCCCCGGG
CAGCTGAACG GCGCGCCGGC GAAGCTGTCG CCGTCGACCA CGATCCAGGG AGCGCCGGGA
CAATGA
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| Protein sequence | MNEPFPRQNS GGAARAVRAA LAATLVALPL IGLAPLAHAE KADQNKPINV EADNLTYDDL
KQVTVATGNV VITKGTIIIK GDRVEVRQDP EGYQYATSFG SGKKHATFRQ KREGLDEYID
GDAERIDYDG KQDLTTLTTA ATVRRLQGTS TIADTVHGSV ITYDGQRDFY TAKGGKDVAA
PGNPNGRVRA MLSPKSGGPG QLNGAPAKLS PSTTIQGAPG Q
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