Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2703 |
Symbol | |
ID | 6177209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3001477 |
End bp | 3003489 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682479 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001809396 |
Protein GI | 172061744 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.135864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCCGTGA TTTCCCCGCT CGAAATGACC CTGCTGCTGC TGCTGGCCTC GGTGGTGGGC GTCGTCGTCT TTCGTTCGTT GAACCTGCCG CCGATGCTCG GCTACCTGAC CGTCGGCATC CTGGTTGGCC CGCACTCATT CGGCATCGCC GCGGACCTCG AACGGGCCGA GCACCTCGCG GAATTCGGCG TGGTCTTCCT GATGTTCTCG ATCGGCCTCG AATTCTCGCT CGCGAAGCTG AGGGCGATGC AGCGGCTCGT GTTCGGGCTC GGGCTGCTGC AGGTGGTCGT GACGCTCGTG CTCGCGGTCG CGCTCGGCGC GCTGTTCGAG CGCTGGGTGC ACATCACGTG GCAGGGCAGC GTCGCGCTCG GCGGCGCGCT CGCGATGTCG TCGACGGCGA TCGTGTCGAA GATGCTCGCC GAGCGGCTCG AGATCGAGAC CGAGCACGGC CGCAACATCT TCGGCGTGCT GCTGTTCCAG GATCTCGCGG TGGTGCCGCT GCTGATCGTG ATCGCCGCGT TCGGCGCGGA GTCGTCGAAG GATCTCGCGA TCACGCTCGG CTTCGCGGCG GTCAAGATCG TGATCGCGCT CGCGCTGCTG CTCGTCATCG GCCAGCGCTT CATGACGCGC TGGCTCAACG TGGTCGCGCG GCGCCGCTCG CAGGAACTGT TCGTGCTGAA CCTGCTGCTC ATCACGCTCG GCGCCGCGTT CATCACCGAC CGCTTCGGCC TGTCGCTCGC GCTCGGCGCG TTCATCGCGG GAATGTTGAT CTCCGAGACG CCGTTCCGTC ACCAGGTGGA AGAGGACATC AAGCCGTTTC GCGACGTGCT GCTCGGGCTG TTCTTCGTGA CGACCGGGAT GCTGCTCGAT GCGCGCGTGA TCTGGGAGCA CCCGTTGCTC GTGCTGGGCT TCTTCGTCGG GCAGATCCTG TTCAAGGGGA CGATGATCGC GGGGCTCGCG CGCCTGTTCG GCGCGACGCC GGGCGTCGCG ATGCGCACCG GCATCGGGCT CGCGCAGGCC GGCGAATTCG GCTTCGTGCT GCTGAACCTG ATCCTCGACC GGCATCTCGT CGATTCGACG CTGCTGCAGG CGATCCTCGC GTCGATGCTG CTGTCGATGC TCGCCGCGCC GTTCCTGATC CAGAACGCCG ACCGGATCGT GATGCGGCTG TCGTCGACGG AATGGATGCA GCAGTCGCTG CAGATGACGC GGATCGCGAC GCAAAGCCTC AAGCAACGCG GCCACGTGAT CATCTGCGGC TACGGCCGCG CGGGCCAGAA CCTGGCGCGC ATGCTCGAGC AGGAAGGCAT TTCGTACGTC GCGCTGGACC TCGATCCCGA TCGCGTGAGC GCGGCCGCGA CGGCCGGCGA ATCGGTCGTG TTCGGCGACG CCGCGCGTCG CGAGTCGCTG CTCGCGGCCG GTATCCATCG CGCGGCGGCC GTCGCGATCA CGTATGCGAA CACGCCGTCC GCGCTGCGCG TGCTGCACCA CGTGCACGAG CTGGAGCCCA CGCTGCCGGC GATCGTGCGC ACGGTCGACG ACGCCGATCT CGAGAAGCTG CTCGCGGCCG GCGCGACCGA GGTGATTCCG GAAATCGTCG AGGGCAGCCT GATGCTCGCG TCGCACACGC TGGTGCTGGT CGGCGTGCCG ATGCGCAAGG TCGTGCGGCG CGTCGAGGAG ATGCGCGACG AGCGCTACCG GCTGCTGCGC GGCTATTTCC ACGGCGCGGA CGACGCGGAC GACGACGATC ACGAGCAGGT GCGGCTACAA TCGGTGCCGG TCGACGCGCG CGCGGACGCG GTCGGGCGCT CGCTGGAGGA GCTCGGGCTG TATGCGCTCG GGCTGGAAGT CACGGCAATC CGCCGGCACG GGATCCGCGG TGTCGAACCT GACCCGCTGA CCAAGCTGCG CGCGAGCGAT ATCGTCGTGC TGCGCGGGCT GCCCGAGGCG CTCGCGCTCG CGGAGGAGCG GCTGTCGCGC CATCGGCGCG AGCCGCCGGC CGCGGTCGCC TGA
|
Protein sequence | MPVISPLEMT LLLLLASVVG VVVFRSLNLP PMLGYLTVGI LVGPHSFGIA ADLERAEHLA EFGVVFLMFS IGLEFSLAKL RAMQRLVFGL GLLQVVVTLV LAVALGALFE RWVHITWQGS VALGGALAMS STAIVSKMLA ERLEIETEHG RNIFGVLLFQ DLAVVPLLIV IAAFGAESSK DLAITLGFAA VKIVIALALL LVIGQRFMTR WLNVVARRRS QELFVLNLLL ITLGAAFITD RFGLSLALGA FIAGMLISET PFRHQVEEDI KPFRDVLLGL FFVTTGMLLD ARVIWEHPLL VLGFFVGQIL FKGTMIAGLA RLFGATPGVA MRTGIGLAQA GEFGFVLLNL ILDRHLVDST LLQAILASML LSMLAAPFLI QNADRIVMRL SSTEWMQQSL QMTRIATQSL KQRGHVIICG YGRAGQNLAR MLEQEGISYV ALDLDPDRVS AAATAGESVV FGDAARRESL LAAGIHRAAA VAITYANTPS ALRVLHHVHE LEPTLPAIVR TVDDADLEKL LAAGATEVIP EIVEGSLMLA SHTLVLVGVP MRKVVRRVEE MRDERYRLLR GYFHGADDAD DDDHEQVRLQ SVPVDARADA VGRSLEELGL YALGLEVTAI RRHGIRGVEP DPLTKLRASD IVVLRGLPEA LALAEERLSR HRREPPAAVA
|
| |