| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2692 |
|---|
| Symbol | |
|---|
| ID | 6177258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2989421 |
|---|
| End bp | 2990002 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641682468 |
|---|
| Product | phasin family protein |
|---|
| Protein accession | YP_001809385 |
|---|
| Protein GI | 172061733 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01841] phasin family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.468731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.123547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAT TTGCCCCCGA AAAACTCGCC GCCGATTACC AGTCCGGAAT CGCCGCATGG
TTCGCGCTTG CCCGTCCGGC CATCAACGGT TTCGAGGCTG TCGTCGAACT CAATGTACAG
GCGGCCAAGA CGGCGCTCGA GGAGTACGAG GACAAGCTGA AGAACGCGTT CAATATCAGC
AACCCGGCCG CGGGCTTCGC GCAGCAGGTC GCCGTTCCGC AGGAAGCGGC CGGCAAGGCG
GTCGCGTACG GCCGCCATCT GTTCGACATC GCGGTGTCGA CGCAGGCCGA GTGGGCGAAG
GTCGCGCAGG TTCAGTACGA GCAGAACGAC AAGCGCATGA AGGACGTGTT CGGCGAACTG
TCGAAGCACG CGCCGGCCGG TTCGGCCCCG GTGGTCGCCG CGCTGAACTC GGCGCTGTCC
GCGGCGACGG CCGCGGCCGA CACCGTGCGC GCAGCGGCGG GGCAGGCGAT CGAGGCCGCG
CAAAGCGGTT TCGACGCGGT CAGCGAAACG GCGGCGCGCG GTGCCAAGCA GACGGCCACC
GCCGCACGCA AGGAAGCGGC TTCGCGCGAC TCCGCTGCGT GA
|
|---|
| Protein sequence | MSVFAPEKLA ADYQSGIAAW FALARPAING FEAVVELNVQ AAKTALEEYE DKLKNAFNIS
NPAAGFAQQV AVPQEAAGKA VAYGRHLFDI AVSTQAEWAK VAQVQYEQND KRMKDVFGEL
SKHAPAGSAP VVAALNSALS AATAAADTVR AAAGQAIEAA QSGFDAVSET AARGAKQTAT
AARKEAASRD SAA
|
|---|
| |