| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2681 |
|---|
| Symbol | |
|---|
| ID | 6177226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2978601 |
|---|
| End bp | 2979575 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682457 |
|---|
| Product | acyltransferase-like protein |
|---|
| Protein accession | YP_001809374 |
|---|
| Protein GI | 172061722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4261] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.640182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA CCGCATGGGC CGAGCGCCAG GAACGCAGCA ACGCGGCGCT GCTGCGCGCG
ATGAGCTGGA TCTCGCTGCG GTTCGGCCGG CAGCCGTCGC GCGTCGTGCT GCACGCCATC
GCGGCCTATT TCGTGCTGTT CTCGCCGGTC GCCCGCGCGG CGTCGCGCGA CTACCTGCGC
CGCGTGCTCG GCCGTCCGGC GCGCTGGCGC GACGTGTACC GGCACGTGTT CACGTTCGCG
GCGACGATCC ACGACCGCAT CTACCTGATG AACGGCCGCT TCGACCTGTT CGACATCCGG
CTGCACGGCG AAACGCGGGT GGACGACGCG CTCGCCGGCG GGCGCGGCGC AGTGCTGATG
GGCGCGCACC TCGGCAGCTT CGAAGTCGTG CGGGCGATCG GCCGCACGCG GCCGGACCTG
CGGGTCGTCG TCACGATGTT CGAAGAGAAC GCGCGCAAGA TCAACGCGAC GCTCGCCGCC
GTGAATCCGG CCGCGAAGCC GGAAGTGATT CCGCTCGGGC AGGTCGACTC GATGCTGAAG
GTGCGCGAGC GCCTCGACGC GAACTGCATG GTCGGGATGC TCGCCGACCG CACGCTGCTC
GACGACGCGG CCGCGTCGAT GCGGCGGCTG CCGCTGCTCG GCGCGCCGGC CGCGTTCCCG
CTCGGGCCGC TCTACATGGC CGCGATGCTG CGGCGCCCGG TACTGTTCAT GACCGGCCTC
TATCGCGACG GCAATCGCTA CGACGTGCAC TTCGAGACGC TCGCCGATTT CTCCGACGTG
CGTCGCGACA CGCGCGCGGC GGCCGTCGAT GCGGCGCTCG CGCGCTACGT CGCGCTGCTC
GACCGGTATT GCCGCGCGGC CCCGTACAAC TGGTTCAACT ATTTCGATTT CTGGCAGACC
GGCGACGCCG CCGCGCGCCG CGACGATGCG TGCGCGTGCA CCGGGCTGTC CACCCCGAGG
GATTCCGACG CATGA
|
|---|
| Protein sequence | MKRTAWAERQ ERSNAALLRA MSWISLRFGR QPSRVVLHAI AAYFVLFSPV ARAASRDYLR
RVLGRPARWR DVYRHVFTFA ATIHDRIYLM NGRFDLFDIR LHGETRVDDA LAGGRGAVLM
GAHLGSFEVV RAIGRTRPDL RVVVTMFEEN ARKINATLAA VNPAAKPEVI PLGQVDSMLK
VRERLDANCM VGMLADRTLL DDAAASMRRL PLLGAPAAFP LGPLYMAAML RRPVLFMTGL
YRDGNRYDVH FETLADFSDV RRDTRAAAVD AALARYVALL DRYCRAAPYN WFNYFDFWQT
GDAAARRDDA CACTGLSTPR DSDA
|
|---|
| |