| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2676 |
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| Symbol | |
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| ID | 6176991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2973063 |
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| End bp | 2974361 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682452 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001809369 |
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| Protein GI | 172061717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.998164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGTGC ATCCAGTCGA CGCTGAACGG CGAGCGTGTT CCCTGTCGTC CGCCCCGAAT
GCGGTCGCGC CCGGACACAC GGCAGCCGCG CCTGCCGCAT CGCGAGCGGG CATCCCGCCC
GCGGCGAATG GCGGCAGCCA TGCGCTGCGA CTCGCCCGGA TCGATCACGC ACGGCTGGCC
GCGCTGCTGC ACGCTGCGCG GCAGCGCGGC GACGCATTCG AGCACCTGTT TCCCGGCGCG
CTGGGCGCGG TGTGCATCGG CGCGGCCGGA TCGCCGGCCG ATGCGATGGC ACGCATGCTC
GCCGTCGCCG CGCCCGAGCT GCCGCTCGCA CCGGTGCCGA TGGCGCTGCT CGACGCCGGC
GGCCACGCGC GCGGCGGTGC GGTCTGCGAA ATCTGGCAGT GCGACGCGTC CGACTTGCGC
AGCGCGCGAC GCGGCACGCT GCAGTACCGT TACAGCGAAA CCGCGGGGCT CGTGTTCGGC
AGCATCGTCG TGCAGGAAAC CCAGGAAACG CAGGAACCGG CCGATATCGA TCGCGACGGC
GGCACGCCGC TCGAACGCGC GACATACGAT GCGTACCGCG CGCTGTTCGA CGTGCTCGAT
ACGCTCGATC TGCCGCATCC GCTGCGCATC TGGAACACGG TGCCGGCGAT CAATGCGCAT
CAGTTCGGGA TCGAACGCTA TCGTCAGTTC AATATCGGCA GGCAGCGCGC GTTCGACGCG
TGCCGCCGCG CGCTGACGGG CGGCGTGCCG GCCGCCTGCG CGCTCGGTTC GGTCGTGCCG
GCCGCGGGCG ACACGCCGCC GGCCGCGCCG CTCGCGATCC ATTTCATCGC GAGCCGCACG
CCGGCCGATC CGGTCGAGAA CCCGCGCCAG GTCAGCGCGT ATCACTACCC GGCCGAGTAC
GGCCCGCGTG CGCCGACGTT CGCGCGCGCG GCTGCATGGA CCGACGGCGA CGCGGCACCG
CTGCTGTTCA TATCGGGCAC CGCCAGCATC GTCGGTCACC GCACCGTGCA TCGTGGCGAC
GTCGTCGCGC AAACGCGCGA GACGATCGCG AATCTCGCGG CCGTGCTCGA GCAGGCCGCA
CGGCAGGGGC ACGGCCCGTT CACGCTCGCG GACCTGAGCT ATCGCGTCTA CGTGCGCGAC
GCCGGCGACA CCGCGGCGCT CGCCGCGATC GAACGCGCGC TGCGCGATGC GGCCGGCGCC
GACGTGCGCG CGCTGTTCGT CCACGCGCAC GTGTGCCGCG ACGATCTGCT GGTCGAGATC
GACGCGAGCG CCGGCCATCC GCTGGAGCAA CCGTCGTGA
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| Protein sequence | MSVHPVDAER RACSLSSAPN AVAPGHTAAA PAASRAGIPP AANGGSHALR LARIDHARLA
ALLHAARQRG DAFEHLFPGA LGAVCIGAAG SPADAMARML AVAAPELPLA PVPMALLDAG
GHARGGAVCE IWQCDASDLR SARRGTLQYR YSETAGLVFG SIVVQETQET QEPADIDRDG
GTPLERATYD AYRALFDVLD TLDLPHPLRI WNTVPAINAH QFGIERYRQF NIGRQRAFDA
CRRALTGGVP AACALGSVVP AAGDTPPAAP LAIHFIASRT PADPVENPRQ VSAYHYPAEY
GPRAPTFARA AAWTDGDAAP LLFISGTASI VGHRTVHRGD VVAQTRETIA NLAAVLEQAA
RQGHGPFTLA DLSYRVYVRD AGDTAALAAI ERALRDAAGA DVRALFVHAH VCRDDLLVEI
DASAGHPLEQ PS
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