| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2675 |
|---|
| Symbol | |
|---|
| ID | 6177061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2972131 |
|---|
| End bp | 2972937 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682451 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001809368 |
|---|
| Protein GI | 172061716 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGC TGCACGCGTC GTCCACCCAT CTCGTGTTGA TTCCGAGCTA CAACCCGGGC
CTCAAGGTCG ACACGACCGT ACGCAACGCC CGCGCGCAGT GGAATCCGGT GTGGGTCGTC
GTCGACGGCA GCACCGACGG CAGCGCCGAG CGGCTGCAGG CGATGGCCGA GCGCGATCCG
GGGCTGCGCG TGATCGTGCT GCCGGAGAAC CGCGGCAAGG GCGCGGCGGT GCTGGCCGGC
CTCGACGCGG CGGCCGCGAG CGGCTTCACG CACGTGCTGA CGATGGATTC CGACGGCCAG
CATCCGGCCG GGCTGATTCC CGAATTCATG GCCGCATCGC AGGCCAGCCC CGATGCGATG
GTGCTCGGCC TGCCGAAGTT CGACGCGAGC GCGCCGCAGC TGCGCGTGCA GGGCCGGCGG
CTGTCGAACG GCTGGGCCGA CCTCGAGACG CTGTGGGCGG GGATCGGCGA TTCGCTGTAC
GGCTTTCGCG TGTATCCGGT CGCGCCGCTC GCCGCGATCA TGCATCGGCA GCCGTGGATG
CGCGGCTTCG ACTTTGATCC GGAAGCGGCC GTGCGGCTGT GCTGGGCCGG CGTGCGGCCG
ATCCGCATAG AGGCGCCGGT GCGCTACTTC GGCGCGCACG AGGGCGGCGT GTCGCATTTC
CACTACGGTC GCGACAACGC GCTGCTCGCG TGGATGCACC TGCGGCTGTT CGCCGGTTTC
GTGCTGCGGC TGCCGATGCT GGCCGCGCGG CGGCTGATGC GGCGGCCGCG TTCGGCGTTC
AGCCGGTCGC CCGGCCGCGG CGATTGA
|
|---|
| Protein sequence | MSKLHASSTH LVLIPSYNPG LKVDTTVRNA RAQWNPVWVV VDGSTDGSAE RLQAMAERDP
GLRVIVLPEN RGKGAAVLAG LDAAAASGFT HVLTMDSDGQ HPAGLIPEFM AASQASPDAM
VLGLPKFDAS APQLRVQGRR LSNGWADLET LWAGIGDSLY GFRVYPVAPL AAIMHRQPWM
RGFDFDPEAA VRLCWAGVRP IRIEAPVRYF GAHEGGVSHF HYGRDNALLA WMHLRLFAGF
VLRLPMLAAR RLMRRPRSAF SRSPGRGD
|
|---|
| |