Gene BamMC406_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2667 
Symbol 
ID6177296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2962621 
End bp2963394 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID641682443 
Productaldolase II superfamily protein 
Protein accessionYP_001809360 
Protein GI172061708 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTG TACCGAACCA GCCGTTCACG CGTCCCGCCC GTTTCTCCGA GGCCGAATGG 
CAGGCGCGCG TGCAGCTCGC GGCCGCTTAC CGGATCTTCG ACCATCTCGG CTGGACCGAG
CTGATCTACA ACCATATCTC GCTGCGCGTG CCGGGCGAGG ACGGCCATTT CCTGATCAAT
CCGTTCGGGC TCCATTACCG CGAGGTATGC GCGTCGAACC TCGTGAAGAT CGACATCGAC
GGCAACGTGA TCGGCCATTC CGATTGGCCG ATCAACCCGG CGGGCTTCAC GTTCCACAGC
GCGATCCATG CGGCGCTGCC CGACGCGCAC TGCGTGATGC ACGTGCATAC GACGCCGACG
ATGGCCGTGT GCTGCTCGCG CGACGGGCTG TCGTTCTCGA ACTTCTACTC GGCGCAGCTG
TACGGGAAGA TCGCGTATCA CGATTTCGAG GGCATCACCG TGCATCTCGA GGAAGGGCGG
CGCATCGTCG AGAGCGCCGG CGGGCGGCCC GTGTTGCTGC TGCGCAATCA TGGGCCCGTG
ACGATCGGCG CGACGCTCGC GCAGACCTTC TCGCTGATGT GGCTGCTCAA TCGCGCGTGC
GAGGTGCAGG TCGCGACCCA TGCGATCGGC GACGCGCTGC CGATCGCGCT GCCGGTGCTC
GAGGGCTGCG TGCGCGATTC GCTGAATTTC GATCCGAAGC ATGGCGCAGG GCAGGACGCG
TTCGACGCAT TGCAGCGCAT CGTCGATCGT ATCGATCCCG GCTATCGCGC GTGA
 
Protein sequence
MQRVPNQPFT RPARFSEAEW QARVQLAAAY RIFDHLGWTE LIYNHISLRV PGEDGHFLIN 
PFGLHYREVC ASNLVKIDID GNVIGHSDWP INPAGFTFHS AIHAALPDAH CVMHVHTTPT
MAVCCSRDGL SFSNFYSAQL YGKIAYHDFE GITVHLEEGR RIVESAGGRP VLLLRNHGPV
TIGATLAQTF SLMWLLNRAC EVQVATHAIG DALPIALPVL EGCVRDSLNF DPKHGAGQDA
FDALQRIVDR IDPGYRA