| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2654 |
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| Symbol | |
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| ID | 6177016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2948996 |
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| End bp | 2950519 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682430 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001809347 |
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| Protein GI | 172061695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCC ACGATTACCT GAAGAAAATC CTCACCGCGC GCGTCTACGA CGTCGCGCTC
GAGACGGAAC TCGAACCCGC CCGCAACCTG TCGGCCCGAC TGCGCAACCC CGTTTACCTG
AAGCGCGAGG ACAACCAGCC GGTGTTCTCG TTCAAGCTGC GCGGCGCGTA CAACAAGATG
GCGCACATTC CGGCCGACGC GCTCGCGCGC GGCGTGATCA CGGCATCGGC CGGCAATCAT
GCGCAGGGCG TCGCGTTCTC CGCGGCCCGG ATGGGCATCA AGGCCGTGAT CGTCGTGCCC
GTCACGACGC CGCAGGTGAA GGTCGACGCG GTGCGTGCGC ACGGCGGCCC GAGCGTCGAG
GTGATCCAGG CGGGCGAGTC GTACAGCGAT GCGTATGCGC ATGCCGTGAA GGTACAGGCC
GAACGCGACC TCACGTTCGT CCACCCGTTC GACGATCCGT ACGTGATCGC CGGCCAGGGC
ACGATCGCGA TGGAAATCCT GCGGCAGCAC CAGGGCCCGA TTCACGCGAT CTTCGTGCCG
ATCGGCGGCG GCGGCCTCGC GGCCGGCGTG GCCGCGTACG TGAAGGCGGT GCGGCCGGAG
ATCAAGGTGT TCGGCGTGCA GGCCGAGGAT TCATGTGCGA TGGCGCAGTC GCTGCAGAAG
GGCGAGCGCG TCGAGCTGAG CGAAGTCGGC CTGTTCGCGG ACGGCACCGC GGTGAAGCTC
GTCGGCGAGG AAACCTTCCG GCTCTGCAGC GAATTCCTCG ACGGCGTCGT GACGGTCGAC
ACCGACGCGC TGTGCGCGGC GATCAAGGAC GTGTTCCAGG ACACGCGCAG CGTGCTCGAG
CCGTCCGGCG CGCTCGCGGT CGCAGGTGCG AAACGCTACG CGGAACGCGA AGGGATCGAG
AACCAGACGC TCGTCGCGGT CACGTCCGGC GCGAACATGA ACTTCGACCG GATGCGTTTC
GTTGCCGAAC GCGCGGAAGT CGGCGAGGCG CGCGAAGCCG TGTTCGCGGT CACGATCCCC
GAGGAGCGCG GCAGCTTCAA GCGCTTCTGC TCGCTCGTCG GCGAGCGCAA CGTCACCGAG
TTCAACTATC GGATCGCCGA TGCGCAGGCC GCGCATATCT TCGTCGGCGT GCAGATCAAG
CGGCGCGGCG AATCGGCGGA GATCGCCGCG AACTTCGAGT CGCACGGCTT CAAGACCGTC
GACCTGACGC ACGACGAGCT GTCGAAGGAA CACATCCGCT ACATGGTGGG CGGCCGCTCG
CCGCTCGCGC TCGACGAACG CCTGTTCCGC TTCGAATTCC CGGAACGGCC GGGCGCGCTG
ATGAAGTTCC TGTCGTCGAT GGCGCCGGAC TGGAACATCA GCCTGTTCCA TTACCGCAAC
CAGGGTGCAG ACTACAGCTC GATCCTCGTC GGGCTGCAGG TGCCGCAGGC CGATCGCGCC
GAGTTCGAAC GCTTCCTCGC GGCGCTCGGC TATCCGTATG TCGAAGAGAG CGCCAATCCG
GCGTATCGGC TCTTCCTGTC GTAA
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| Protein sequence | MASHDYLKKI LTARVYDVAL ETELEPARNL SARLRNPVYL KREDNQPVFS FKLRGAYNKM
AHIPADALAR GVITASAGNH AQGVAFSAAR MGIKAVIVVP VTTPQVKVDA VRAHGGPSVE
VIQAGESYSD AYAHAVKVQA ERDLTFVHPF DDPYVIAGQG TIAMEILRQH QGPIHAIFVP
IGGGGLAAGV AAYVKAVRPE IKVFGVQAED SCAMAQSLQK GERVELSEVG LFADGTAVKL
VGEETFRLCS EFLDGVVTVD TDALCAAIKD VFQDTRSVLE PSGALAVAGA KRYAEREGIE
NQTLVAVTSG ANMNFDRMRF VAERAEVGEA REAVFAVTIP EERGSFKRFC SLVGERNVTE
FNYRIADAQA AHIFVGVQIK RRGESAEIAA NFESHGFKTV DLTHDELSKE HIRYMVGGRS
PLALDERLFR FEFPERPGAL MKFLSSMAPD WNISLFHYRN QGADYSSILV GLQVPQADRA
EFERFLAALG YPYVEESANP AYRLFLS
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