Gene BamMC406_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2648 
Symbol 
ID6176169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2940810 
End bp2941436 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID641682424 
Productsterol-binding domain-containing protein 
Protein accessionYP_001809341 
Protein GI172061689 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.238877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.26532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTG CCGCCAAGCC TTTTGCTGCT GCTGTCAATC ACCTGCTCGC GCGCGAATCG 
TGGGCGCGCG ACCGCCTGAT CCCCTACGCG GGCAAGACCG CCCGGCTCGA CGTGCCGCCC
GTCACGCTCA CGCTGCTCGT GCAGCCCGAC GGTTATCTGT CCGCGGTGGA CGCGCACGAT
GCGCAACACG TCGACGTGTC GATCGCGCTC GCGGGCGACA CGCTCGCCGC GTTCCTGCAG
GGCGGCCAGC CGGCCGTGAT GAAGCACGTG AAGATCGAGG GCGACGCGGA GTTCGCGACG
CAGATCGCGA AGCTGGCCGA GCACCTGCGC TGGGAACCTG AAGAAGATCT CGCGAAGCTG
GTAGGCGACG CGGCGGCGCA CCGGATCGCG ACTGTCGTGC GCGACGCCGG CGCGCGCGCG
CGCCGCACCG GCCGCAACGT GCTCGATTCC GTCGCCGAGT ACTGGCTCGA CGAGAACCCG
CAAGTCGTTC GACGCACGGT GCTCGGCGGC TTCGACGCTG AACTGGCGCG TGCGCGCGAT
GCGCTCGCAC GGGTCGAAAA ACGGATCGAG CGACTCGAAC AAAAAATCGG CGCGCGCACG
GGTTCCGGCC CGCGCGGCGC GCACTGA
 
Protein sequence
MTFAAKPFAA AVNHLLARES WARDRLIPYA GKTARLDVPP VTLTLLVQPD GYLSAVDAHD 
AQHVDVSIAL AGDTLAAFLQ GGQPAVMKHV KIEGDAEFAT QIAKLAEHLR WEPEEDLAKL
VGDAAAHRIA TVVRDAGARA RRTGRNVLDS VAEYWLDENP QVVRRTVLGG FDAELARARD
ALARVEKRIE RLEQKIGART GSGPRGAH