Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2648 |
Symbol | |
ID | 6176169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2940810 |
End bp | 2941436 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641682424 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_001809341 |
Protein GI | 172061689 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.238877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.26532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTG CCGCCAAGCC TTTTGCTGCT GCTGTCAATC ACCTGCTCGC GCGCGAATCG TGGGCGCGCG ACCGCCTGAT CCCCTACGCG GGCAAGACCG CCCGGCTCGA CGTGCCGCCC GTCACGCTCA CGCTGCTCGT GCAGCCCGAC GGTTATCTGT CCGCGGTGGA CGCGCACGAT GCGCAACACG TCGACGTGTC GATCGCGCTC GCGGGCGACA CGCTCGCCGC GTTCCTGCAG GGCGGCCAGC CGGCCGTGAT GAAGCACGTG AAGATCGAGG GCGACGCGGA GTTCGCGACG CAGATCGCGA AGCTGGCCGA GCACCTGCGC TGGGAACCTG AAGAAGATCT CGCGAAGCTG GTAGGCGACG CGGCGGCGCA CCGGATCGCG ACTGTCGTGC GCGACGCCGG CGCGCGCGCG CGCCGCACCG GCCGCAACGT GCTCGATTCC GTCGCCGAGT ACTGGCTCGA CGAGAACCCG CAAGTCGTTC GACGCACGGT GCTCGGCGGC TTCGACGCTG AACTGGCGCG TGCGCGCGAT GCGCTCGCAC GGGTCGAAAA ACGGATCGAG CGACTCGAAC AAAAAATCGG CGCGCGCACG GGTTCCGGCC CGCGCGGCGC GCACTGA
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Protein sequence | MTFAAKPFAA AVNHLLARES WARDRLIPYA GKTARLDVPP VTLTLLVQPD GYLSAVDAHD AQHVDVSIAL AGDTLAAFLQ GGQPAVMKHV KIEGDAEFAT QIAKLAEHLR WEPEEDLAKL VGDAAAHRIA TVVRDAGARA RRTGRNVLDS VAEYWLDENP QVVRRTVLGG FDAELARARD ALARVEKRIE RLEQKIGART GSGPRGAH
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