| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2647 |
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| Symbol | ubiB |
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| ID | 6176246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2939220 |
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| End bp | 2940797 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682423 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001809340 |
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| Protein GI | 172061688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.155538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTT TCCGTTTCAT CAAGATTGTC TACACCGTCA TCCGCTTCGG CCTCGACGAG
GTGATGCTGT CCCGGATCGA CGACCGGCGC GTGAAGCTGC TGCTGCGGCT CACGACGATC
GGCCGCCGCT ATTCCGACCC GCCCGCCGTC CGGCTGCGTC ACGCGCTCGA GAGCCTCGGC
CCGATCTTCG TGAAGTTCGG CCAGGTGCTG TCGACGCGCC GCGACCTGCT GTCGGTCGAT
TTCGCGAACG AACTCGCGAA GCTGCAGGAC CAGGTGCCGC CGTTCGATTC GGCTGTCGCG
ATAGCGATCA TCGAGAAGTC GCTCGGCGCG CCGGTCGACG AGCTGTTCGA CGAATTCGAG
CGCGAGCCGA TCGCGAGCGC GTCGATCGCG CAGGTGCATT TCGGGAAGTT GAAGCAGGGC
GTGCACGCGG GCAAGGCCGT CGCGGTCAAG GTGCTGCGCC CGAACATGCT GCCGGTGATC
GATTCCGACC TCGCGCTGAT GCGCGACATC GCGACGTGGA CCGAGCGCAT GTGGGCCGAC
GGCCGGCGCC TGAAACCGCG CGAAGTGGTC GCCGAATTCG ACAAGTACCT GCACGACGAG
CTCGACCTGA TGCGCGAGGC CGCGAACGGC AGCCAGCTGC GCCGCAACTT CGCGGGCCTC
GACCTGCTGC TCGTGCCCGA GATGTTCTGG GATTTCTCGA CGTCGCAGGT GCTCGTGATG
GAGCGCATGA CCGGCGTGCC GATCAGCCAG GTGGAGACGC TGCGCACCGC GGGCGTCGAC
ATCAAGAAGC TCGCGCGCGA AGGCGTCGAA ATCTTCTTCA CGCAGGTGTT CCGCGACGGT
TTCTTCCATG CGGACATGCA CCCGGGCAAC ATTCAGGTGA GTCTCGATCC GAAGACTTTC
GGCCGCTATA TCGCGCTCGA TTTCGGGATC GTGGGCGCCT TGTCGGATTT CGACAAGAAC
TACCTCGCGC AGAACTTCCT CGCGTTCTTC AAGCGCGACT ACCACCGTGT CGCGACGCTG
CACCTTGAAT CGGGCTGGGT GCCGCCCGAG ACGCGCGTCG AGGAACTCGA AAGCGCGATC
CGCGCGGTGT GCGAGCCGTA TTTCGACCGC GCGCTGAAGG ACATCTCGCT CGGCCAGGTG
CTGATGCGCC TGTTCTCGAC GTCGCGCCGC TTCAACGTCG AGATCCAGCC GCAGCTCGTG
CTGCTGCAGA AGACGATGCT GAACGTCGAG GGGCTCGGCC GCTCGCTCGA CCCCGAACTC
GACCTGTGGA AGACCGCGAA GCCGTATCTC GAGCGCTGGA TGACCGAGCA GATCGGCCTG
CGCGGCTGGT ACGAGCGCTT CAAGGTCGAG GCGCCGCAGT GGAGCAAGAC GCTGCCGCAA
CTGCCGCGCC TGATCCACCA CGCGATGGCG GCGCGCCACG ATGCGCCACG TGCGGCGAGC
GAGGACCTGA TGCGTCAGGT CCTCATCGAG CAGAAACGGA CCAACCGGCT GTTGCAGGCA
TTGCTGATCT TCGGTCTTGC CGTCGGCGTC GGGGCGCTCG TCGCGCGCGT GCTGCTCGCG
CTCGCGTACG GCGCGTGA
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| Protein sequence | MRIFRFIKIV YTVIRFGLDE VMLSRIDDRR VKLLLRLTTI GRRYSDPPAV RLRHALESLG
PIFVKFGQVL STRRDLLSVD FANELAKLQD QVPPFDSAVA IAIIEKSLGA PVDELFDEFE
REPIASASIA QVHFGKLKQG VHAGKAVAVK VLRPNMLPVI DSDLALMRDI ATWTERMWAD
GRRLKPREVV AEFDKYLHDE LDLMREAANG SQLRRNFAGL DLLLVPEMFW DFSTSQVLVM
ERMTGVPISQ VETLRTAGVD IKKLAREGVE IFFTQVFRDG FFHADMHPGN IQVSLDPKTF
GRYIALDFGI VGALSDFDKN YLAQNFLAFF KRDYHRVATL HLESGWVPPE TRVEELESAI
RAVCEPYFDR ALKDISLGQV LMRLFSTSRR FNVEIQPQLV LLQKTMLNVE GLGRSLDPEL
DLWKTAKPYL ERWMTEQIGL RGWYERFKVE APQWSKTLPQ LPRLIHHAMA ARHDAPRAAS
EDLMRQVLIE QKRTNRLLQA LLIFGLAVGV GALVARVLLA LAYGA
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