Gene BamMC406_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2645 
Symbol 
ID6176085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2938144 
End bp2938479 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content71% 
IMG OID641682421 
ProductFmdB family regulatory protein 
Protein accessionYP_001809338 
Protein GI172061686 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.596631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.169906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCT ACGCCTATCG ATGCGAAGCG TGCGGTTTCG CGAAGGACAT GCTCCAGAAG 
ATGAGCGACG CGCCGCTGTC GCAGTGCCCC GAATGCGGGA AGGATGCTTT TCGCAAGCAG
GTCACCGCCG CCGGCTTCCA GCTGAAGGGC TCCGGCTGGT ATGTCACCGA TTTCCGCGGT
GGCTCGGGCG GCACCAGCGC GCCGGCGACG GCGACGGGCG AAGCGGGGGC TGCGGCACCC
GCCGCCGCGG CGCCGGTGGC AGCCGCCACG AGTTCCGAAA GTACGACGAC GAGCGCCGCG
CCGGCCCAGG CTGCGGCGCC CGCCGCCGGC AGTTGA
 
Protein sequence
MPIYAYRCEA CGFAKDMLQK MSDAPLSQCP ECGKDAFRKQ VTAAGFQLKG SGWYVTDFRG 
GSGGTSAPAT ATGEAGAAAP AAAAPVAAAT SSESTTTSAA PAQAAAPAAG S