Gene BamMC406_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2644 
Symbol 
ID6176887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2937432 
End bp2938082 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID641682420 
Producthypothetical protein 
Protein accessionYP_001809337 
Protein GI172061685 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.392534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.186242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AGACGACCCT GAAATCGGTG TTTCTTACCG GCCTGCTGGT TCTCGTCCCG 
CTCGCGATCA CGCTGTGGGT GCTCGGTCTC ATCATCGGCA CGATGGACCA GACGCTGCTG 
CTGCTGCCCG AATCGTGGCA GCCGGAGCGG GCGCTCGGCT TCCGCCTGCC GGGGCTCGGC 
GCGGTGCTGA CGCTCGCGTT CATCTTCGTC GTCGGGCTGG CCACGCAGAA CTTCATCGGC 
CAGAAGCTCG TCACGTGGTG GAACGCGGTC GTGCGTCACA TCCCGGTCGT CGGGCCGATC 
TACACGAGCG TCAAGCAGGT GTCGGACACG CTGCTGTCGA GCAGCGGCAA CGCGTTCCGC 
AAGGCGCTGC TGATCGAATA CCCGCGTCGC GGCTCGTATA CGATCGCGTT TCTGACCGGC 
GCGCCCGGCG GCGACGTGGT CAACCATCTG ACGGAAGAGT ACGTGAGCGT GTACGTGCCC 
ACGACACCGA ACCCGACGTC GGGCTTCTTC CTGATGCTCC CGAAGAGCGA AGTCATCGAA 
CTCGACATGT CGGTCGATGC CGCGCTCAAG TACATCGTCT CGATGGGCGT CGTGGCGCCT 
TCGGCGCCGG CTCCGGTGCC CGCCCGCCGC CCCGTCGAGC CGCCGCTGTA A
 
Protein sequence
MMKKTTLKSV FLTGLLVLVP LAITLWVLGL IIGTMDQTLL LLPESWQPER ALGFRLPGLG 
AVLTLAFIFV VGLATQNFIG QKLVTWWNAV VRHIPVVGPI YTSVKQVSDT LLSSSGNAFR 
KALLIEYPRR GSYTIAFLTG APGGDVVNHL TEEYVSVYVP TTPNPTSGFF LMLPKSEVIE 
LDMSVDAALK YIVSMGVVAP SAPAPVPARR PVEPPL