| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2643 |
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| Symbol | aspS |
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| ID | 6176199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2935562 |
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| End bp | 2937364 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641682419 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001809336 |
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| Protein GI | 172061684 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.21858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.167975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGC GTACTGAATA CTGCGGTCTC GTGACCGAAC ACCTGCTGGG CCAAACCGTG
TCGCTGTGCG GCTGGGTGCA GCGCCGCCGC GATCACGGCG GTGTGATCTT CATCGACCTG
CGCGATCGTG AAGGCCTCGT GCAGGTGGTG TGCGACCCGG ATCGCGCGGA AATGTTCGCG
ACCGCCGAAG GCGTGCGCAA CGAGTTCTGC GTGCAGATCA AGGGTCTCGT GCGCAACCGT
CCGGAAGGCA CGGTCAACGC CGGCCTGAAG AGCGGCAAGA TCGAAGTGCT GTGTCACGAA
CTGAACGTGC TGAATGCGTC GGTCACGCCG CCGTTCCAGC TCGACGACGA CAACCTGTCG
GAAACGACGC GCCTCACGCA CCGCGTGCTC GACCTGCGCC GTCCGCAGAT GCAGCACAAC
CTGCGCCTGC GCTACCGCGT CGCGATCGAA GCGCGCAAGT ACCTCGACGA GCAGGGCTTC
ATCGATATCG AAACGCCGAT GCTGACGAAG AGCACGCCGG AAGGCGCGCG CGACTACCTC
GTGCCGTCGC GCGTGAACGC GGGCCAGTTC TTCGCGCTGC CGCAGTCGCC GCAGCTGTTC
AAGCAGCTGC TGATGGTCGC GAACTTCGAC CGTTACTACC AGATCACCAA GTGCTTCCGC
GATGAAGACC TGCGCGCCGA CCGCCAGCCG GAATTCACGC AGATCGACTG CGAGACGTCG
TTCCTCGGCG AGCAGGAAAT CCGTGACCTG TTCGAAGACA TGATCCGTCA CATCTTCAAG
ACGACGATCG ACGTCGAACT CGACGCGAAA TTCCCGGTGA TGCCGTACTC GGAAGCGATG
GCGCGTTTCG GTTCGGACAA ACCGGACCTG CGCGTGCAGC TCGAATTCAC CGAGCTGACC
GACGCGATGA AGGACGTCGA CTTCAAGGTG TTCAGCACGC CGGCCAACGC GAAGGACGGC
CGTGTCGCGG CGCTGCGCGT GCCGAAGGGC GGCGAGCTGT CGCGCGGCGA CATCGACGGC
TACACGGAAT TCGTGCGCAT CTACGGCGCG AAGGGCCTCG CGTGGATCAA GGTCAACGAG
AAGGCGAAGG GCCGCGACGG CCTGCAGAGC CCGATCGTCA AGAACCTGCA CGACGCATCG
ATCGCGGCGA TCCTCGAGCG CACCGGTGCT GAAGACGGCG ACATCATCTT CTTCGCGGCC
GACCGCGCGA AGGTGGTCAA CGACAGCCTC GGCGCGCTGC GCCTGAAGAT CGGTCATTCG
GAATTCGGCA AGGCGAACGG CCTCGTCCAG GCCGGCTGGA AGCCGCTGTG GGTCGTCGAT
TTCCCGATGT TCGAATACGA CGACGAAGAC GCGCGCTACG TCGCGGCGCA CCACCCGTTC
ACGAGCCCGA AGGACGAGCA CCTCGAATAC CTCGAGACCG ATCCGGGCCG CTGCCTCGCG
AAGGCGTACG ACATGGTGCT GAACGGCTGG GAAATCGGCG GCGGCTCGGT GCGTATCCAC
CGCGAGGAAG TGCAGAGCAA GGTGTTCCGC GCGCTGAAGA TCGGCGCGGA AGAAGCGCAG
CTGAAGTTCG GCTTCCTGCT GGACGCGCTG CAGTACGGCG CGCCGCCGCA CGGCGGTATC
GCGTTCGGTC TCGACCGCAT CGTCACGATG ATGGCCGGTG CCGACTCGAT CCGCGACGTG
ATCGCGTTCC CGAAGACGCA GCGTGCGCAG GACCTGCTCA CGCAGGCGCC GAGCCCGGTC
GACGAGCGTC AACTGCGCGA ACTGCACATC CGTCTGCGTC AGCCGGAACA GCCGAAGGCG
TAA
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| Protein sequence | MSMRTEYCGL VTEHLLGQTV SLCGWVQRRR DHGGVIFIDL RDREGLVQVV CDPDRAEMFA
TAEGVRNEFC VQIKGLVRNR PEGTVNAGLK SGKIEVLCHE LNVLNASVTP PFQLDDDNLS
ETTRLTHRVL DLRRPQMQHN LRLRYRVAIE ARKYLDEQGF IDIETPMLTK STPEGARDYL
VPSRVNAGQF FALPQSPQLF KQLLMVANFD RYYQITKCFR DEDLRADRQP EFTQIDCETS
FLGEQEIRDL FEDMIRHIFK TTIDVELDAK FPVMPYSEAM ARFGSDKPDL RVQLEFTELT
DAMKDVDFKV FSTPANAKDG RVAALRVPKG GELSRGDIDG YTEFVRIYGA KGLAWIKVNE
KAKGRDGLQS PIVKNLHDAS IAAILERTGA EDGDIIFFAA DRAKVVNDSL GALRLKIGHS
EFGKANGLVQ AGWKPLWVVD FPMFEYDDED ARYVAAHHPF TSPKDEHLEY LETDPGRCLA
KAYDMVLNGW EIGGGSVRIH REEVQSKVFR ALKIGAEEAQ LKFGFLLDAL QYGAPPHGGI
AFGLDRIVTM MAGADSIRDV IAFPKTQRAQ DLLTQAPSPV DERQLRELHI RLRQPEQPKA
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