Gene BamMC406_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2640 
Symbol 
ID6176316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2932850 
End bp2933449 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content63% 
IMG OID641682416 
ProductTetR family transcriptional regulator 
Protein accessionYP_001809333 
Protein GI172061681 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.308303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.133482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAG GCGAACAGAC GCGTGCCGCG ATACTCGAAG CTGCTTTGGA CCTCGCCAGC 
CGTGACGGGC TGGAGGGGCT GACGATCGGC CTGCTGGCCG AGCGCATGCA GATGAGCAAG 
AGCGGTGTGT TCGCGCACTT CGGATCGCGC GAAGACCTCC AGGTCGAGGT CGTCCGTGAA 
TATCACCATC GTTTTGAAAA CGAGGTGTTC TTTCCGAGCC TGCGCGAGCC GCGAGGCTTG 
CCGCGCCTGC GGGCGATGCT GGCTCGCTGG ACGGAGAAGC GCATCCAGGA GGTGACGACC 
GGATGCATCT ACATCAGCGG AGCCGTCGAG TACGACGACC GGCCTGACAG CCCCGTGCGC 
GAGCAGTTGA TCGCAAGCGT GACGGCCTGG CGTGCCGCGA TGCTGCGTGC CATTTCGCAG 
GCGAAGGAAG AAGGCCATCT GCGTGCGGAT ACCGATCCGG ACCTGATGCT CTTCGAGTTG 
TACAGCTTCA CGCTCGGCCT GCATCACGAC GCACGCTTCC TGCATTCGCC GGATGCCGTG 
CGCCTCACGT GGGCCGCGCT GGAAAAGACG ATCGTTTCGT ATCAGAGCGA GAGCCGTTAG
 
Protein sequence
MRKGEQTRAA ILEAALDLAS RDGLEGLTIG LLAERMQMSK SGVFAHFGSR EDLQVEVVRE 
YHHRFENEVF FPSLREPRGL PRLRAMLARW TEKRIQEVTT GCIYISGAVE YDDRPDSPVR 
EQLIASVTAW RAAMLRAISQ AKEEGHLRAD TDPDLMLFEL YSFTLGLHHD ARFLHSPDAV 
RLTWAALEKT IVSYQSESR