| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2638 |
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| Symbol | |
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| ID | 6176327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2928457 |
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| End bp | 2930892 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682414 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001809331 |
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| Protein GI | 172061679 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.792018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.421295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAATT TCCTGATTCG CAAGGTCGCC GTGCTGGGCG CCGGCGTGAT GGGCGCGCAG
ATCGCCGCGC ACCTCGTCAA CGCGCGCGTG CCGGTGCTGC TGTTCGACCT GCCGGCCAAG
GAAGGCCCGA AGGACGCGAT CGCGCTGAAG GCGATCGAGA ACCTGAAGAA GCTGTCGCCC
GCGCCGTTCG GCGTGAAGGA CGACGCGAAA TACCTCGAAG CCGCGAACTA CGAGGACGAC
ATCGCGAAGC TCGCCGAGTG CGACGTCGTG ATCGAGGCGA TCGCCGAGCG GATGGACTGG
AAGCACGACC TGTACAAGAA GGTCGCGCCG CACATCGCGC CGAATGCGAT CTTCGCGACC
AACACGTCGG GCCTGTCGAT CACGAAGCTG TCCGAAGGTT TCTCGGAAGA GCTGAAGTCG
CGCTTCTGCG GCGTGCACTT CTTCAACCCG CCGCGCTACA TGCACCTGGT CGAGCTGATC
CCGACCGCGC ATACGCGTGC CGACATCCTC GATCAGCTCG AAACGTTCCT GACGAGCATC
GTCGGCAAGG GCGTCGTGCG CGCGAAGGAC ACGCCGAACT TCATCGCGAA CCGCGTCGGC
ATCTTCTCGA TCCTCGCGGT GATCACCGAG GCCGCGAAGT TCGGCCTGCG CTTCGATGAA
GTCGACGATC TGACGGGCAG CCGCCTCGGC CGCGCGAAGT CGGCGACGTT CCGCACCGCG
GACGTGGTCG GCCTCGACAC GATGGCGCAC GTGATCAAGA CGATGCAGGA CAACCTCGCC
GACGATCCGT TCTTCCCGGT CTACCAGACG CCTGCCGTGC TCGCCGAGCT GGTGAAGCAG
GGCGCGCTCG GCCAGAAGAC GGGCGGCGGT TTCTACAAGA AGGAAGGCAA GGCGATCAAG
GTGCTCGACG CGAAGACGGG CACCTATGTG GATGCGGGCG CGAAGGCGGA CGAAACCGTC
GGCCGCATCC TGAAGCGCCC GCCGGCGGAG CGCCTGAAGC TGCTGCGTGA GACGGATCAT
CCGCACGCGC AGTTCCTGTG GTCGATCTTC CGCGACGTGT TCCACTACAT CGGCGTGCAT
CTCGAGTCGA TCGCCGACAA CGCGCGCGAC GTCGACCTCG CGATCCGCTG GGGCTTCGGC
TGGAACGAAG GCCCGTTCGA AGGCTGGCAG GCCGCCGGCT GGAAGCAGGT CGCCGAGTGG
GTGCAGGAAG ACATCGCGGC CGGCAAGGCG CTCGCGAACG CGCCGCTGCC GTCGTGGGTG
CTCGAAGGCC CGGTCGCCGA GCAGGGCGGC GTGCACACGG CCGAAGGCTC GTGGGCACCG
GCGTCGAAGC GCTTCGTGCC GCGTTCCGAC CTGGCCGTCT ACGGCCGGCA GGTGTTCCGC
GCGCCGCTCC TCGGCGAAAC CGGCGTCGAC CCGAAGACGT ACGGCAAGAC GCTGTTCGAA
ACCGACGCGG TGCGTGCGTG GGTCGACGAC CGTGCAGGCG AAGACGACGT CGTGATCGTG
TCGTTCAAGT CGAAGATGAA CACGATCGGG CCGAGCGTGA TCGACGGCCT CGTGCAGGCG
ATCGAACTCG CGGAGAAGGA TTACAAGGGC GTGGTGATCT GGCAGCCGAC GTCGCTGAAG
CTCGGCACGC CGGGCGGCCC GTTCTCGGCC GGCGCGAACC TCGAGGAGGC GATGCCCGCG
TTCATGATGG GCGGCGCGAA GGGCATCGAG CCGTTCGTGA AGAAGTTCCA GGAAGGCATG
CTGCGCGTGA AGTACGCGAA CGTGCCGGTC GTCGCGGCCG TGTCGGGCAT CGCGCTCGGC
GGCGGGTGCG AGCTGATGCT GCACAGCGCG AAGCGCGTGG TGCACGTCGA GAGCTACATC
GGTCTCGTCG AAGTGGGCGT CGGCCTCGTG CCGGCGGGCG GCGGCCTGAA GGAAGCGGCG
CTGCGCGCGG CGGAGGCGGC CACGGCCGCG AACGCGACCA CCGACATCCT GAAGTTCGTC
ACGAAGTCGT TCGAGAACGC GGCGATGGCG AAGGTGTCGT CGTCGGCGCA CGATGCGCGC
GCGATGGGCT ACCTGAAGCC GTCCGACACG ATCGTCTTCA ACGTGTTCGA ACTGCTCGAC
ACCGCGAAGA AGGAAGCGCG TGCGCTGGCC GACGTCGGCT ACCGCGCCCC GCTGCGCGCG
AAGGACGTGC CGGTGGCGGG CCGCTCGGCG ATCGCGACGA TCAAGGCATC GCTCGTCAAC
ATGCGTGACG GCCGCTTCAT CAGCGATCAC GACTACCTGA TCGCGAGCCG CATCGCCGAA
GCCGTGTGCG GCGGCGACGT CGAAGCCGGC AGCCTCGTCG ACGAGCAGTG GCTGCTCGCG
CTCGAGCGCC GTGCGTTCGT CGAGCTGCTC GGCACGCAGA AGACGCAGGA ACGGATCATG
GGCATGTTGC AGACCGGCAA GCCGGTGCGT AACTGA
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| Protein sequence | MSNFLIRKVA VLGAGVMGAQ IAAHLVNARV PVLLFDLPAK EGPKDAIALK AIENLKKLSP
APFGVKDDAK YLEAANYEDD IAKLAECDVV IEAIAERMDW KHDLYKKVAP HIAPNAIFAT
NTSGLSITKL SEGFSEELKS RFCGVHFFNP PRYMHLVELI PTAHTRADIL DQLETFLTSI
VGKGVVRAKD TPNFIANRVG IFSILAVITE AAKFGLRFDE VDDLTGSRLG RAKSATFRTA
DVVGLDTMAH VIKTMQDNLA DDPFFPVYQT PAVLAELVKQ GALGQKTGGG FYKKEGKAIK
VLDAKTGTYV DAGAKADETV GRILKRPPAE RLKLLRETDH PHAQFLWSIF RDVFHYIGVH
LESIADNARD VDLAIRWGFG WNEGPFEGWQ AAGWKQVAEW VQEDIAAGKA LANAPLPSWV
LEGPVAEQGG VHTAEGSWAP ASKRFVPRSD LAVYGRQVFR APLLGETGVD PKTYGKTLFE
TDAVRAWVDD RAGEDDVVIV SFKSKMNTIG PSVIDGLVQA IELAEKDYKG VVIWQPTSLK
LGTPGGPFSA GANLEEAMPA FMMGGAKGIE PFVKKFQEGM LRVKYANVPV VAAVSGIALG
GGCELMLHSA KRVVHVESYI GLVEVGVGLV PAGGGLKEAA LRAAEAATAA NATTDILKFV
TKSFENAAMA KVSSSAHDAR AMGYLKPSDT IVFNVFELLD TAKKEARALA DVGYRAPLRA
KDVPVAGRSA IATIKASLVN MRDGRFISDH DYLIASRIAE AVCGGDVEAG SLVDEQWLLA
LERRAFVELL GTQKTQERIM GMLQTGKPVR N
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