Gene BamMC406_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2622 
Symbol 
ID6176036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2912119 
End bp2912976 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID641682398 
Producthypothetical protein 
Protein accessionYP_001809315 
Protein GI172061663 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.276697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC CGCTCTTCGA CGGGCCGGCC GCGGCCTCGC CGGCACCGTC GGTGCCCGCC 
GCGCCGCCCA CGTCACCTGA AGCGGCCACG GCTCCCGCGG TGCCCACCGC GCCGCTCGAT
CCGGGCCCCG CGCGCGATCG CTCCCGCGTC CGTACGTTCG CACTCGACAG CCGCGTCCTC
GAATACCGGC TCAAGCGCTC CGCGCGCCGC ACGATCGGCT TCACGATCGA CGGCAGCGGG
CTGTCGATCA CCGCGCCGCG CTGGGTCACG CTCGCCGACA TCGAAGCGGC GATCGCCGAG
AAGCAGCGCT GGATCTTCGC GAAGCTCGCG GAGTGGAAGA CCCGCACCGA GCAGCGCGCG
CTGCCGCAAA TCGACTGGCG CGACGGCGCG CAACTCCCGT ATCTCGGCAA GACGATCACG
ATCGCGCTCG GCGCGGGCGC CGTCGCGTTC GACGCCGACG CGCTGCGCCT GTCGCTGCCG
CTGCCCGTGC AGGCGGACAT GCAGCAGATC AAGGATCGCG TGCAGGGCTG GCTGCAGGGC
GAAGCGAAGC GGATCTTCGG CGAACGGCTG GTGATCTACG CGGAAAGGCT CGGCGTCACG
TATTCGATGT ACGCGCTATC GTCGGCCGCG ACGCGCTGGG GCAGTTGCTC GAGCGACGGC
AAGATCCGGC TGAACTGGCG GCTGATCCAT TTCCCGATGT CGATCGTCGA CTACGTCGTC
GCGCACGAGC TGTCGCACCT GCGCGAAATG AACCACAGCC CGGCCTTCTG GCAGACCGTC
GAATCGATCT TCCCGGAATT CCGCGAAGCA CGGCACACGC TCAAGCATCA CCCGCCCGAA
CTGCTGCCGG CGCTGTAG
 
Protein sequence
MDLPLFDGPA AASPAPSVPA APPTSPEAAT APAVPTAPLD PGPARDRSRV RTFALDSRVL 
EYRLKRSARR TIGFTIDGSG LSITAPRWVT LADIEAAIAE KQRWIFAKLA EWKTRTEQRA
LPQIDWRDGA QLPYLGKTIT IALGAGAVAF DADALRLSLP LPVQADMQQI KDRVQGWLQG
EAKRIFGERL VIYAERLGVT YSMYALSSAA TRWGSCSSDG KIRLNWRLIH FPMSIVDYVV
AHELSHLREM NHSPAFWQTV ESIFPEFREA RHTLKHHPPE LLPAL