Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2613 |
Symbol | |
ID | 6175963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2901760 |
End bp | 2902377 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682389 |
Product | ChaC family protein |
Protein accession | YP_001809306 |
Protein GI | 172061654 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.303262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCAC CCGCCTACCC GCCGTCGATC GGCGAGGGAC GGCTGCTGAC GCAAGACGAA CTCGCGGCGT CGCTCGCGCA CACGATGCGC GACTGGGACG GCCAGCAGGA TCTCTGGCTG TTCGGCTATG GCTCGCTGAT CTGGAACCCC GGGCTGCCGA CCGTCGCCGC CGTGCGCGGC AAGGTCCACG GCTACCATCG CGGGCTCTAC CTGTGGTCGC GCGTGAACCG CGGCACGCCG GAACGTCCGG GCCTCGTGCT CGCGCTCGAT CGCGGCGGCT CGTGCTCCGG CATCGCATTT CGGCTCGCGG GCCCGACCGC GCAGCCGCAT CTCGAGACCT TGTGGAAACG CGAGATGCCG ATGGGCTCGT ACCGGCCCGC GTGGCTGCCG TGCTCGCTCG AGACCGGCGA ACGCGTGAAC GCGCTGGCCT TCGTGATGCG CCGCGACGCG CCGGCCTACA CGGGCAAGCT GACGGACCCC GTCGTGAAGG AAGTGTTCGG CTGCGCGGCC GGCCGCTACG GCACGACGCT CGACTACGTG AGCCGCACCG TGGAGGCGCT GCGCGCGAGC GGCATCCCCG ATCGCGCGCT GGAAGGGCTG CTCGCGCGAT GCCGGTGA
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Protein sequence | MLPPAYPPSI GEGRLLTQDE LAASLAHTMR DWDGQQDLWL FGYGSLIWNP GLPTVAAVRG KVHGYHRGLY LWSRVNRGTP ERPGLVLALD RGGSCSGIAF RLAGPTAQPH LETLWKREMP MGSYRPAWLP CSLETGERVN ALAFVMRRDA PAYTGKLTDP VVKEVFGCAA GRYGTTLDYV SRTVEALRAS GIPDRALEGL LARCR
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