| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2609 |
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| Symbol | |
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| ID | 6175986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2897157 |
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| End bp | 2898089 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682385 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809302 |
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| Protein GI | 172061650 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.379478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAC TCGGCGACAT CCGGCTGTTC GTCGAAGCGG CGGAACTGGG CAGCCTGTCC
GCGGCAGGGC GCAAGCTGAA CCTCACGCCG GCCGCCGCGA GCGCGCGCCT CGCGAAGCTC
GAGGCCAAGG TCGCGACGCG GCTGTTCGAG CGCTCGACCA GACAGCTGCG GCTCACCGAC
GAAGGCCGGC TCTACCTGAA CTGCTGCCGG CAGGCGCTGC AGGCGCTCGA CGACGCGCAC
GCGCTGCTGC AGGAAGGCCG CAACGTGGTG GCCGGCAAGG TGCGGCTGTC GTCGACGTCC
GATTTCGGCC GCAACCAGCT GCTCGACTGG CTCGACGAAT TCACCACGCT GCATCCGGGC
GTCACGTTCT CGCTGACGGC GTCCGATTCG GCGTCGAACC TGTGGCAGGA CGAAATCGAC
CTGGCGATCC GCTTCGCCGC GCCGCCCGAC GGCGCGTTGA TCGCGCGCCG GCTCGCCGCG
AACCGGCGCG TGCTGTGCGC GGCGCCGTCG TTCGTCGCGC GCCACGGCAT GCCGGCGGAT
CCGCACGATC TGGCCCGCTT TCCCTGCAAC GTGATCACGA TCGCGTCGGG GCCGATGAAC
ACGTGGCGCT TCACGCGCGG CGACGAAGTA CAGACTCACA CGGTGCCGGT GTCGACCGCG
TTCGAGACCA ACGACGGCGG CCTCACCCGC GAATGGACGC TGCGCGGCCA CGGCATCGCG
CTGAAATCGC TGTGGGACAT CGCCGACGAC GTGCGCGCCG GCCGGCTGCG CGTGCTGCTG
CCCGACTGGC GGCACCAGGA CGCGCCGCTG CACGCGATCT ATCACAGCAA GCGCTACATG
GCGCCGCGCG TGCGCGTGCT GCTCGACTTC CTCGCCGAAC GCTTCGCGCG CGAGGAAGCG
GCGCTCGACG ACCTGCTGAA CGCGTGCCGC TGA
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| Protein sequence | MDRLGDIRLF VEAAELGSLS AAGRKLNLTP AAASARLAKL EAKVATRLFE RSTRQLRLTD
EGRLYLNCCR QALQALDDAH ALLQEGRNVV AGKVRLSSTS DFGRNQLLDW LDEFTTLHPG
VTFSLTASDS ASNLWQDEID LAIRFAAPPD GALIARRLAA NRRVLCAAPS FVARHGMPAD
PHDLARFPCN VITIASGPMN TWRFTRGDEV QTHTVPVSTA FETNDGGLTR EWTLRGHGIA
LKSLWDIADD VRAGRLRVLL PDWRHQDAPL HAIYHSKRYM APRVRVLLDF LAERFAREEA
ALDDLLNACR
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