| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2604 |
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| Symbol | |
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| ID | 6175962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2892076 |
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| End bp | 2892792 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682380 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001809297 |
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| Protein GI | 172061645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCTT ATATTGCGGA ATTCATCGGC ACGGCGATCC TCGTGCTGCT CGGCAACGGC
GCGGTCGCAA ACGTGCTGCT TGCGAAGACC AAGGGCAAAG GAGCGGATCT GATCGTCATC
GTGATGGGCT GGGCGATGGC GGTGTTCGTC GCCGTCTACG TGACGGCTTC GTTCAGCGGC
GCGCACCTGA ACCCGATCGT CACGATCAGC CTCGCGCTCG CGGGCAAGTT CGCATGGTCG
AAGGTCGGCG GCTACATTGT TGCGCAGATG CTCGGCGGGA TGGCCGGCGC GTTGCTCGTG
TGGCTCGCGT ATCGCCAGCA CTTCGCGAAG GAAGCCGATG CGGACCTGAA GCTCGCGGTG
TTCTGCACGG CGCCCGCGAT CCGCAGCGTC ACGCACAACG TGCTGACCGA AGCGATCTGC
ACGTTCGTGC TGATTCTCGG CGTGCTGTAC CTCGCGTCGC CGCAGGTCGG CCTCGGCGCG
CTCGACGCGC TGCCCGTCGG CTTGCTCGTG CTCGGCATCG GCATCTCGCT CGGCGGCCCG
ACCGGCTATG CGATGAGCCC GGCGCGCGAC CTGTCGCCGC GCCTGATGCA TGCGCTGCTG
CCGATCCCCG GCAAGCGCGA CAGCGACTGG CGCTATGCGT GGGTGCCGGT GATCGGCCCG
CTGCTCGGCG GCGCCGCCGC GGCCGGCCTG TATCTGCGTC TGCACGCGAT GGCCTGA
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| Protein sequence | MSPYIAEFIG TAILVLLGNG AVANVLLAKT KGKGADLIVI VMGWAMAVFV AVYVTASFSG
AHLNPIVTIS LALAGKFAWS KVGGYIVAQM LGGMAGALLV WLAYRQHFAK EADADLKLAV
FCTAPAIRSV THNVLTEAIC TFVLILGVLY LASPQVGLGA LDALPVGLLV LGIGISLGGP
TGYAMSPARD LSPRLMHALL PIPGKRDSDW RYAWVPVIGP LLGGAAAAGL YLRLHAMA
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