| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2599 |
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| Symbol | |
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| ID | 6175955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2886957 |
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| End bp | 2887736 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682375 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001809292 |
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| Protein GI | 172061640 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.509382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAG ATCCCCGCCT CACCCTCAAC GCGCGCCAGC AGGAATTGCT CGAATGGGTG
CAGCGCGACG GCTTCGTGAC GGTCGACGAT CTCGCCGCGC ACTTCGCGGT CACGCCGCAG
ACGATCCGCC GCGACGTCAA CTGGCTCGCG GACCTGAACC TGCTGCGCCG CTACCACGGC
GGCGCGAGCC TGCCGACCAG CTCGGAGAAC GTGTCGTACA CCGCGCGCCA GCGGATGTTC
CACGACGAGA AGCGGCGCAT CGCGGCGCTG GCGGCGTCGC ACATCCCCGA CCAGGCGTCG
CTGTTCATCA ACCTCGGCAC GACGACCGAG GAAGTCGCGC GCGCGCTGAA CCGCCATCAC
GGGCTGCACG TGATCACGAA CAACCTGAAC GTCGCGTCGA TGATGAGCGG CTATCCCGAC
TGCGAGGTGC TGATCACGGG CGGCATCGTG CGGCCGTGGG ACAAGGGGAT CGTCGGCGAA
CTCGCGATCG ACTTCATCCG CCAGTTCAAG GTCGACTACG CGATCATCGG CACGTCGGCG
ATCGAGGCCG ACGGCACGCT GCGCGACTTC GACACGCGCG AGGTGCGCGT GGCCGAGGCG
ATCATGCAGC ATGCGCGCAC GGTCTATCTC GTCGCCGACC ACTCGAAGGT CGGCCGCCCG
GCGCTCGTGC GCCAGGGGCA TCTGAGCCAG GTCCATGCGC TTTTCACCGA CAAGCCGCTG
CCGCCGGAGA TGGCCGACGC GGTGGCCGCC GCGGGCACCG AAGTGTACGT CGCCGAATAA
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| Protein sequence | MTRDPRLTLN ARQQELLEWV QRDGFVTVDD LAAHFAVTPQ TIRRDVNWLA DLNLLRRYHG
GASLPTSSEN VSYTARQRMF HDEKRRIAAL AASHIPDQAS LFINLGTTTE EVARALNRHH
GLHVITNNLN VASMMSGYPD CEVLITGGIV RPWDKGIVGE LAIDFIRQFK VDYAIIGTSA
IEADGTLRDF DTREVRVAEA IMQHARTVYL VADHSKVGRP ALVRQGHLSQ VHALFTDKPL
PPEMADAVAA AGTEVYVAE
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