| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2587 |
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| Symbol | |
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| ID | 6178971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2872369 |
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| End bp | 2875476 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682363 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001809280 |
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| Protein GI | 172061628 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGC CACTGAATCG CATCCTGCCG CGCATGACCG GTAGTGCATC GGTCTGGACG
TGGGTCAAGT GGTCGTTGCT GGCCGCGCTG GTGATCGCCG TGGCGATCCT CGTGCGGCTC
GTGATGACCG AGATCGCGAC GTCGCGCATG CAGGCGCACT ACCTGTCCGA ACTCACGCGC
GACGTCGGCT ACACGGTCGA GGCGGGCGCG AGCGACCACA TCCGCTTCCC TGCGAACGGG
CCGTACGACC AGCGCCTCGG TTATTCGATG ATTCCCGCGT TCCAGGAGCG CCTGCTCGCA
CGCGGCTTCG TCGTCGGCAA GCAGGCGCGC GATTCCGACC GGATGCTGTC GCTCGCCGAT
CGCGGCCTGT TCCTTCCTTA CGAAGAGAAA GATCAGGCCG GGCTGATGCT GTTCGACTCG
ACCGGCTCGC CGCTGTTCGC GACCGTGTTC CCGCACCGCG TGTACACCGA CTTCGACACG
GTGCCGCGCA TGGTCGCCGA TTCGCTGATG TTCATCGAGG ATCGCTACCT GCTCGACCCG
AACCAGCCGA ACCGCAATCC GGCGATCGAC TGGGGGCGCT TCAGCCGCGC GCTCGCCGAT
CAGGCGCTGC ACGTCGTCAA CCATCACCAG GCGCGCCCGG GCGGCAGCAC GCTCGCGACG
CAGATCGAGA AGTTCCGCCA TTCGCCCGAC GGCCGCACCG CGACGCCGCC GGAGAAGCTG
CGCCAGATCG CGTCCGCGTC GATCCTCGCG TACCTGAACG GCCCGCAGAC GATGCTCGGG
CGCCGCACGA TCCTGGTGCG CTACCTGAAC TCGGTGCCGC TCGCCGCGCG GCCGCACGTG
GGTGAAATCA ACGGTATCGG CGACGGTCTC GCCGCGTGGT ACGGCCGCGA CTTCAACGAC
GTGAACCGCA TCCTGTCCGC GCCGACCACC GGCGACAACG TCGACGAGCA GGGCAAGGCG
TTCCGCGAGG TGCTGTCGCT GATCATCGCG CAGCGCGCGC CGTCGTACTT CCTGAACCGC
GGCTATCCGG CGCTGCAGAA GCTCACCGAC AGCTACCTGC GGCTGCTGTC GAACGGCGGC
GTGATCTCTC CCGCGCTGCG CGATGCGGCG CTCGCCGCGC AGATCGAGCG CGCCGCGCCG
CCGGCCGCCG CGCGCGTGCA GTCGTTCGTG TCGCGCAAGG CCGTGTCGTC CGCGCACGCG
TCGCTGCTCT CGGCTCTCGG CATCAGCGAC CTGTACCAGC TCGACCAGCT CGATCTGGAA
GCCACCAGCA CGCTCGACAA CGGCGTGCAG CAGGCGGTCG CCGACCGGCT CGCGCGGGCG
TCGACCCGCG ACGGCGCGCA GGCGGCCGGC CTGTACGGCT TCGAGATGCT CGCGCCGAAG
GACGACCCGT CTCATCTGAC GTACAGCTTC ACGCTGTACG AGCATCGCAA CGGCGCGAAC
ATGCTGCGCG TGCAGACCGA CAGCGTGAAC CAGCCGTTCG ACGTGAACCG CGGCGGCCGC
ATCAACCTCG GCTCGACCGC GAAACTGCGC ACGCTGATCA CCTACCTGCA GATCGTCTCC
GAGCTGCACG CGCGCTATGG CAACCTGCCG AACGCGCAAC TCGCGCACGT GAAGCCCGAT
CCGATCGACG GGCTGTCGCG CTGGGCGCTC GACTACCTGT CGCACACGCG CGACCGCTCG
CTGCAGGCGA TGCTCGATGC GGCGGTCGAA CGCAAGTACT CGGCGAGCCC CGACGTGTTC
TACACGGGCG GCGGCGCGCA GGTGTTCTCG AACTTCGAAA AGTCGGACAA CGGCCGCATC
CTGACGCTGC ATACGGCGTT CGAGCATTCG GTCAACCTGG TGTTCGTGCG GCTGATGCGC
GACATCGTCC ACTACGAAAT GCTGAAGGCG GCCGGTCCGT CGACGTCGTG GCTCGGCGAT
CCGGAGCAGC GCAAGCATTA CCTCGAGCAG TTCGTCGACG GCGAAAGCAA GGTGTACGTG
AAGCGCTACT ACACGCGCTA CGCGGGCAAG ACGCCGGACG ACGCGCTCGC GCTGATGCTG
CAGGACGTGC GCAAGTCGCC GCCGAAGATC GCGACGGTGC TGCGCAGCGT CGCGCCGAAC
GAATCGCTCG CGTGGTTCAG CGCGCACATG CGCGCGCAGC TGAAGGGCAC GCCGGCCGCG
ACGATGTCGG ACGACGATCT CGCCGCGCTC TACGCGAAGT ACGCGATCGG CCGCTTCAAC
CTCAACGATC TCGGCTACAT CGCGAGCGTC CACCCGCTCG CGCTGTGGAC GCTCAATTAC
CTGCGCGCCC ACCCGAACGC ACCGCTCGCC GACGTCCAGC GCGACAGCCG CGATGCGCGT
TTCTACACGT ACTCGTGGCT GTACAAGACC CGCTACCACG CGACCCAGGA CCGGCGCATC
CGCCACATGG TCGAGCTGCG CGCGTATGGG GAAATCACGA AGGCGTGGCG CGCGCTCGGC
TATCCGTTCG AGGAAGTCAC GCCGTCGTTC GCGGCCGCGA TCGGCGCATC GGGCGACCAG
CCGGACGCGC TCGCGAAACT GATCGGCCTG ATCGCGAACG GCGGCCAGAA GGCGCCGACC
GAGACGATCA CGCGCCTCGA CTTCGCGAAG GGCACGCCGT ACGAAACGCG CTTCGTGCGC
GCGGCCGCGC AGCCGCAGCC GCTGCTGTCG CCCGAGATCG TCAACGTGGC GCGCACGCTG
CTGGGCGACG TCGTGCAGCA CGGCACCGCG CGGCGCCTCG CGGGCGGCTT CACGCTGCCC
GACGGCAAGA CGCTCCCGGT GTACGGCAAG ACCGGGACGG GCGACCAGCG CTTCAATGTG
TACGCACGCG GCGCGCGGCT GATCGAGTCG CGCAAGGTCA ACCGCAGCGG CACGTTCGTG
TTCGTGCTCG GCGACCGCTT CTTCGGCGTG CTGACGGCGA CCGCGCACGA GCCGTACGCG
GCGCGCTACG ACTTCACGAG CGCGATGGCC GTGCAGTTGC TGAAGTCGAT GGCGCCGGCG
CTCGCGCCGC TGATCGAGCG CCCGGCCGAA GCCGGCACGC GCACGGCGGG CCCCGCGCCG
CAGGCGGAAA CGCCCACGCC GCAGGGCGCG CCGGTCGCGC CGTCCTGA
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| Protein sequence | MNRPLNRILP RMTGSASVWT WVKWSLLAAL VIAVAILVRL VMTEIATSRM QAHYLSELTR
DVGYTVEAGA SDHIRFPANG PYDQRLGYSM IPAFQERLLA RGFVVGKQAR DSDRMLSLAD
RGLFLPYEEK DQAGLMLFDS TGSPLFATVF PHRVYTDFDT VPRMVADSLM FIEDRYLLDP
NQPNRNPAID WGRFSRALAD QALHVVNHHQ ARPGGSTLAT QIEKFRHSPD GRTATPPEKL
RQIASASILA YLNGPQTMLG RRTILVRYLN SVPLAARPHV GEINGIGDGL AAWYGRDFND
VNRILSAPTT GDNVDEQGKA FREVLSLIIA QRAPSYFLNR GYPALQKLTD SYLRLLSNGG
VISPALRDAA LAAQIERAAP PAAARVQSFV SRKAVSSAHA SLLSALGISD LYQLDQLDLE
ATSTLDNGVQ QAVADRLARA STRDGAQAAG LYGFEMLAPK DDPSHLTYSF TLYEHRNGAN
MLRVQTDSVN QPFDVNRGGR INLGSTAKLR TLITYLQIVS ELHARYGNLP NAQLAHVKPD
PIDGLSRWAL DYLSHTRDRS LQAMLDAAVE RKYSASPDVF YTGGGAQVFS NFEKSDNGRI
LTLHTAFEHS VNLVFVRLMR DIVHYEMLKA AGPSTSWLGD PEQRKHYLEQ FVDGESKVYV
KRYYTRYAGK TPDDALALML QDVRKSPPKI ATVLRSVAPN ESLAWFSAHM RAQLKGTPAA
TMSDDDLAAL YAKYAIGRFN LNDLGYIASV HPLALWTLNY LRAHPNAPLA DVQRDSRDAR
FYTYSWLYKT RYHATQDRRI RHMVELRAYG EITKAWRALG YPFEEVTPSF AAAIGASGDQ
PDALAKLIGL IANGGQKAPT ETITRLDFAK GTPYETRFVR AAAQPQPLLS PEIVNVARTL
LGDVVQHGTA RRLAGGFTLP DGKTLPVYGK TGTGDQRFNV YARGARLIES RKVNRSGTFV
FVLGDRFFGV LTATAHEPYA ARYDFTSAMA VQLLKSMAPA LAPLIERPAE AGTRTAGPAP
QAETPTPQGA PVAPS
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