Gene BamMC406_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2586 
Symbol 
ID6179001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2871236 
End bp2872123 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID641682362 
ProductLysR family transcriptional regulator 
Protein accessionYP_001809279 
Protein GI172061627 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TCCTGCCAAT GCGGCTATTC ATCAAGGTGG CCGAACTTCA TAGTTTCGCG 
CGTGCAGCCA CGGAACTGAA CATCTCCAAC TCGTCGGCTA CCCGCCTCAT CATGGGCATC
GAGGACCGGC TCGGCGCACG CCTGCTGAAC CGCACGACGC GCAGCCTGTC GCTCACCGAT
GCCGGTCATC TGTATCTCGC GCAGATCCGT CACGTGGTCG AGGAAATCGA CCGCGTCGAG
GAAACGATCG CGTCGATGCA TCACGAGCCG ATCGGGTCGC TGAAGATCGC CGCGCCGGTC
ATGTTCGGCA TGCACGTGCT CGCCCCGGCG ATCGATGCAT TCAAGACGCT GCATCCGGCC
ATCGTGCCGG AAGTCACGAT CGTCGACCGC CATGTCGATC TCGTATCGGA AGGCTTCGAC
GTCGGGCTGC TGCTGTCGCA GCGCATCAGC ACCAACACGC TGGTGACGCG GCCGCTCACG
CGACTCAAGC GGATCGTCTG CGCGGCGCCC CGGTATGTCG AAGCCCACGG CGCACCGATC
CATCCGCACG ATCTCGCGTC GCACGCGTGC CTCACGTTCC ATGCCGACTT CGCGGGCGAA
TACATGTCGT TCGATCACGA GCCGACGCGC GTCGCGGTGC GACCGAACAA ATCCGCATCG
TCGAACAACA TCGGGTTGAT CCGGAACTGG GCGTTGTCGG GCATGGGCAT CGCGGTGCTG
CCCGACTTCC TCGTCGAAGC GGATCTCGCC GACGGACGAT TGCTCGCGCT GCTTCCCGAC
TATCGGCTCG ATGACCTCGA GATGAATATC GCGTACCCGA GCCGGCGGCA CTTTCCGCGC
AAGACGCGGC TTTTCGTCGA TCACCTGGTC GAGTATTTCG TCAGGTGA
 
Protein sequence
MDELLPMRLF IKVAELHSFA RAATELNISN SSATRLIMGI EDRLGARLLN RTTRSLSLTD 
AGHLYLAQIR HVVEEIDRVE ETIASMHHEP IGSLKIAAPV MFGMHVLAPA IDAFKTLHPA
IVPEVTIVDR HVDLVSEGFD VGLLLSQRIS TNTLVTRPLT RLKRIVCAAP RYVEAHGAPI
HPHDLASHAC LTFHADFAGE YMSFDHEPTR VAVRPNKSAS SNNIGLIRNW ALSGMGIAVL
PDFLVEADLA DGRLLALLPD YRLDDLEMNI AYPSRRHFPR KTRLFVDHLV EYFVR