Gene BamMC406_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2578 
Symbol 
ID6178980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2863063 
End bp2864031 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID641682354 
ProductAraC family transcriptional regulator 
Protein accessionYP_001809271 
Protein GI172061619 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCG CGCCGCGCTC GATCCTGATC CTCGCGTTCC CTCGTGTGCA GTTGCTCGAC 
GTGAGCGGGC CGCTGCAGGT GTTCGCGTCC GTCAACGAAC TCGCGGAGGA ACGGGGGCAG
CCCGCGCCGT ATGCGCCGCG CGTCGTCGCC GTCGAGGCCG GGCCCATCGA GACGTCGTCC
GGCCTCGTCG TGATGGCCGA TTCGCTGCGC TCCGCCGCTC GGCCGGATAC GGTGATCGTG
GCCGGCGGCA AGGGCGTGCG CGCCGCGTCG CAGGATGCGC GGATGGTGCG CTGGGTCCGG
CAGCAGGCGC GGCGTGCGCG ACGTGTCGCG TCGGTCTGCA CGGGCGCGTT CCTGCTCGCC
GAGGCCGGGC TGCTCGACGG GCGGCGTGCG GTCACGCACT GGGCGCGCTG CGACGAATTC
GCGGCGCGCT ACCCGAACGT GCGCGTCGAG CCCGATCCGA TCTTCATCCG CGAAGGCGCG
CTGTGGACGT CGGCCGGCGT CACGGCCGGC ATCGATCTCG CGCTCGCGCT CGTCGAGGAG
GATCTCGGGC GCGCGGTCGC GCTCGACGCC GCGCGCGAAC TCGTGGTGTT CCTGAAGCGG
CCGGGTGGGC AGGCACAGTT CAGCGCGATG CTGTCGATGC AGCGCACCGA CGATCGTTTC
GGCGAACTGC ATGCATGGAT CGCCGAGCAC CTGACGGCCG ACCTGTCGGT GCCCGCGCTC
GCCGAGCGCG TCAGCATGAG CGAGCGCAGC TTCGTGCGCC ACTACCGCGC GGGCACCGGC
CGCACGCCCG CGCGCGCGGT CGAGCAGATT CGCGTCGAGG CCGCGCAGCG TCTGCTCGGC
GAAACCGCGT GGCCCGTCAA GCGGATCGCC ACGCGATGCG GCTTCGGTTC GGAAGAGACG
CTGCGGCGCA GTTTCGTACG CGTGCTCGGC GTGTCGCCTC AGGGCTATCG CGAGCGGTTC
GTGCGGTAA
 
Protein sequence
MPTAPRSILI LAFPRVQLLD VSGPLQVFAS VNELAEERGQ PAPYAPRVVA VEAGPIETSS 
GLVVMADSLR SAARPDTVIV AGGKGVRAAS QDARMVRWVR QQARRARRVA SVCTGAFLLA
EAGLLDGRRA VTHWARCDEF AARYPNVRVE PDPIFIREGA LWTSAGVTAG IDLALALVEE
DLGRAVALDA ARELVVFLKR PGGQAQFSAM LSMQRTDDRF GELHAWIAEH LTADLSVPAL
AERVSMSERS FVRHYRAGTG RTPARAVEQI RVEAAQRLLG ETAWPVKRIA TRCGFGSEET
LRRSFVRVLG VSPQGYRERF VR