Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2575 |
Symbol | |
ID | 6178920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2858135 |
End bp | 2859694 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682350 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001809268 |
Protein GI | 172061616 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCC CGGCCCATTC CCGCCGCCCG AGCGGCGCGC CGGCGTCGGC CGCCGACGAC GCACGCGACG CGCGCTACGA AAACCCGTTC GCGCCGCCCG ACGAAACCGA TGCACCCGAG GCGCCGCGCC CGCGCTCGCT GTTCGGCGAA ATCCTCGACT GGATGCTGGC GCCGCTGCTG CTGCTGTGGC CGATGAGCAT CGCCGTCACC TATCTCGTCG CGAAGACGAT CGCGAACGGC CCGTTCGACC GCGCGCTCGA GACCAACGCA TACGTGCTCG CGCGGCAGAT CCATCCGGTC AACGGCGTCG CCGAGCTGAC GCTGCCGCAG CAGACGCGCG ACTTCCTGCG CGCGGACAAC GTCGACAGCG TGTACTTCCA GGTGCTCGGC ACGCGCGGCG AGCTGGTCGC GGGCGAGGCC GACATGCCGC TGCCGCGCGA CGAGGACCGG CCGCCCCCGG GCGTCGTCGT GTTCCGCGAC GACCTTTTGC GCGGCAACGA CGTGCGCGTC GCGTATACGA CCGTCGCACT GCCGGAGCCG GGCGGCGCAC AGCCCGTGCC CGTGCTCGTG CAGGTCGGCG AGACGCTCGA CAAGCGCAAC GCGCTCGCGA ACGACATCAT CAAGGGCGTG ATCCTGCCGC AGTTCGTGAT CCTGCCGCTC GCGATCCTGC TCGTCTGGTT CGGGCTGTCG CGCGGGCTCG CGCCGCTCAA CGCGCTGCAA GCGCACATCC GCGCGCGGCG GCCCGACGAC CTGTCGCCCG TCGAGGCGCA GCGCGCGCCG CCCGAGATCG AGCCGCTCGT CACGTCGTTC AACGACCTGC TCGCGCGGCT CGAGCAGAAC ATGGCGTTGC AGAAGCGCTT CATCGCCGAC GCCGCGCACC AGATGAAGAC GCCGCTCGCG GGGCTGCGCA CGCAGGCCGA ATTCGCGTTG CGCCATCCCG TGCCGCCCGA CGTGCAGCGC TCGCTCGAAC AGATCGCGAC GAGTTCCGAG CAGGCCGCGC GGCTCGTCAC GCAACTGCTC GCGCTCGCAC GCGCCGAGAA CCGCGCGAGC GGGCTGACGT TCGAGCCGGT CGAAATCGGC GCGCTGGCGC GCCGCACGGT GCGCGACTGG GTGCAGGCCG CGCTCGCGAA GCGCATGGAC CTCGGTTACG AAGGCCCGGA GGACGACGCG CCGCTCGACG TCGACGGCAA TCCCGTGATG CTGCGCGAGA TGCTCGGCAA CCTGGTCGAC AACTCGATCC GCTACACGCC CGAAGGCGGC CGCATCACCG TGCGCGTGCG GGCCGAGCCG GCGGCGCGGC GCGTGCATCT CGAAGTCGAG GACACCGGGC CCGGCATCCC GGCCGCCGAA CGCGAGCGCG TGGTCGAGCG CTTCTACCGG ATCCTCGGCC GCGAAGGCGA CGGCAGCGGC CTCGGGCTCG CGATCGTGCG CGAGATCGCG ACGCAGCACG GCGGCACGCT GACGCTCGAC GATCATGTCT ATCAGCACGC GCCGCGCCTC GCCGGCACGC TCGTGCGCAT CAGCCTGCCG CTGTCGGAGT CCGCCGCGGA TCCAGCCTGA
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Protein sequence | MATPAHSRRP SGAPASAADD ARDARYENPF APPDETDAPE APRPRSLFGE ILDWMLAPLL LLWPMSIAVT YLVAKTIANG PFDRALETNA YVLARQIHPV NGVAELTLPQ QTRDFLRADN VDSVYFQVLG TRGELVAGEA DMPLPRDEDR PPPGVVVFRD DLLRGNDVRV AYTTVALPEP GGAQPVPVLV QVGETLDKRN ALANDIIKGV ILPQFVILPL AILLVWFGLS RGLAPLNALQ AHIRARRPDD LSPVEAQRAP PEIEPLVTSF NDLLARLEQN MALQKRFIAD AAHQMKTPLA GLRTQAEFAL RHPVPPDVQR SLEQIATSSE QAARLVTQLL ALARAENRAS GLTFEPVEIG ALARRTVRDW VQAALAKRMD LGYEGPEDDA PLDVDGNPVM LREMLGNLVD NSIRYTPEGG RITVRVRAEP AARRVHLEVE DTGPGIPAAE RERVVERFYR ILGREGDGSG LGLAIVREIA TQHGGTLTLD DHVYQHAPRL AGTLVRISLP LSESAADPA
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