Gene BamMC406_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2575 
Symbol 
ID6178920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2858135 
End bp2859694 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content72% 
IMG OID641682350 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001809268 
Protein GI172061616 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CGGCCCATTC CCGCCGCCCG AGCGGCGCGC CGGCGTCGGC CGCCGACGAC 
GCACGCGACG CGCGCTACGA AAACCCGTTC GCGCCGCCCG ACGAAACCGA TGCACCCGAG
GCGCCGCGCC CGCGCTCGCT GTTCGGCGAA ATCCTCGACT GGATGCTGGC GCCGCTGCTG
CTGCTGTGGC CGATGAGCAT CGCCGTCACC TATCTCGTCG CGAAGACGAT CGCGAACGGC
CCGTTCGACC GCGCGCTCGA GACCAACGCA TACGTGCTCG CGCGGCAGAT CCATCCGGTC
AACGGCGTCG CCGAGCTGAC GCTGCCGCAG CAGACGCGCG ACTTCCTGCG CGCGGACAAC
GTCGACAGCG TGTACTTCCA GGTGCTCGGC ACGCGCGGCG AGCTGGTCGC GGGCGAGGCC
GACATGCCGC TGCCGCGCGA CGAGGACCGG CCGCCCCCGG GCGTCGTCGT GTTCCGCGAC
GACCTTTTGC GCGGCAACGA CGTGCGCGTC GCGTATACGA CCGTCGCACT GCCGGAGCCG
GGCGGCGCAC AGCCCGTGCC CGTGCTCGTG CAGGTCGGCG AGACGCTCGA CAAGCGCAAC
GCGCTCGCGA ACGACATCAT CAAGGGCGTG ATCCTGCCGC AGTTCGTGAT CCTGCCGCTC
GCGATCCTGC TCGTCTGGTT CGGGCTGTCG CGCGGGCTCG CGCCGCTCAA CGCGCTGCAA
GCGCACATCC GCGCGCGGCG GCCCGACGAC CTGTCGCCCG TCGAGGCGCA GCGCGCGCCG
CCCGAGATCG AGCCGCTCGT CACGTCGTTC AACGACCTGC TCGCGCGGCT CGAGCAGAAC
ATGGCGTTGC AGAAGCGCTT CATCGCCGAC GCCGCGCACC AGATGAAGAC GCCGCTCGCG
GGGCTGCGCA CGCAGGCCGA ATTCGCGTTG CGCCATCCCG TGCCGCCCGA CGTGCAGCGC
TCGCTCGAAC AGATCGCGAC GAGTTCCGAG CAGGCCGCGC GGCTCGTCAC GCAACTGCTC
GCGCTCGCAC GCGCCGAGAA CCGCGCGAGC GGGCTGACGT TCGAGCCGGT CGAAATCGGC
GCGCTGGCGC GCCGCACGGT GCGCGACTGG GTGCAGGCCG CGCTCGCGAA GCGCATGGAC
CTCGGTTACG AAGGCCCGGA GGACGACGCG CCGCTCGACG TCGACGGCAA TCCCGTGATG
CTGCGCGAGA TGCTCGGCAA CCTGGTCGAC AACTCGATCC GCTACACGCC CGAAGGCGGC
CGCATCACCG TGCGCGTGCG GGCCGAGCCG GCGGCGCGGC GCGTGCATCT CGAAGTCGAG
GACACCGGGC CCGGCATCCC GGCCGCCGAA CGCGAGCGCG TGGTCGAGCG CTTCTACCGG
ATCCTCGGCC GCGAAGGCGA CGGCAGCGGC CTCGGGCTCG CGATCGTGCG CGAGATCGCG
ACGCAGCACG GCGGCACGCT GACGCTCGAC GATCATGTCT ATCAGCACGC GCCGCGCCTC
GCCGGCACGC TCGTGCGCAT CAGCCTGCCG CTGTCGGAGT CCGCCGCGGA TCCAGCCTGA
 
Protein sequence
MATPAHSRRP SGAPASAADD ARDARYENPF APPDETDAPE APRPRSLFGE ILDWMLAPLL 
LLWPMSIAVT YLVAKTIANG PFDRALETNA YVLARQIHPV NGVAELTLPQ QTRDFLRADN
VDSVYFQVLG TRGELVAGEA DMPLPRDEDR PPPGVVVFRD DLLRGNDVRV AYTTVALPEP
GGAQPVPVLV QVGETLDKRN ALANDIIKGV ILPQFVILPL AILLVWFGLS RGLAPLNALQ
AHIRARRPDD LSPVEAQRAP PEIEPLVTSF NDLLARLEQN MALQKRFIAD AAHQMKTPLA
GLRTQAEFAL RHPVPPDVQR SLEQIATSSE QAARLVTQLL ALARAENRAS GLTFEPVEIG
ALARRTVRDW VQAALAKRMD LGYEGPEDDA PLDVDGNPVM LREMLGNLVD NSIRYTPEGG
RITVRVRAEP AARRVHLEVE DTGPGIPAAE RERVVERFYR ILGREGDGSG LGLAIVREIA
TQHGGTLTLD DHVYQHAPRL AGTLVRISLP LSESAADPA