| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2567 |
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| Symbol | |
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| ID | 6178909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2850746 |
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| End bp | 2851342 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682342 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001809260 |
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| Protein GI | 172061608 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAG CCTTTTCAGT TTCCCTGTTC CGGCGCGTCG CCGCCGATCT GCGGCGCGCG
CGCCGGCCCG TGCCACGTTG GCGGCCGGCC GGCTTCACGC TGATCGAGCT GATGATCGTG
CTCGCGATCG TCGGCGTGAT CGCGGCCTAT GCGATTCCCG CGTACCAGGA TTACCTCGCG
CGGTCGCGCG TCGGCGAGGG GCTCGCGCTC GCGTCGTCCG CGCGGCTCGC GGTCGCCGAC
AATGCCGCGA GCGGCGCGGG CCTCGACGGC GGCTACAGCC CGCCGGTCGC CACCCGGAAC
GTCGAATCCG TCCGGATCGA CGCCGATACC GGCCAGATCA CGGTGGCGTT CACCACCCGC
GTCGCCGCGG CCGGCGCGAA TACGCTCGTG CTGGTGCCGT CCGCGCCGGA CAAGGCCGAT
ACGCCGACCG CACGGGTGCC GCTGAAAAAG GGTGCGATGC AGGCCGGCGC GATCGCATGG
GAATGCTTTG CCGCCGGCAA GGCCGCGTCA TCGCTGCCGG CGCCAGGCGC GGGCCCGTTG
CCTGCGGAGG CGGCGACGTT GCCAGCGAAA TACGCGCCGG CGGAATGCCG CGCATAG
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| Protein sequence | MFEAFSVSLF RRVAADLRRA RRPVPRWRPA GFTLIELMIV LAIVGVIAAY AIPAYQDYLA
RSRVGEGLAL ASSARLAVAD NAASGAGLDG GYSPPVATRN VESVRIDADT GQITVAFTTR
VAAAGANTLV LVPSAPDKAD TPTARVPLKK GAMQAGAIAW ECFAAGKAAS SLPAPGAGPL
PAEAATLPAK YAPAECRA
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